| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0831 |
|---|
| Symbol | ribH |
|---|
| ID | 7400797 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 825733 |
|---|
| End bp | 826137 |
|---|
| Gene Length | 405 bp |
|---|
| Protein Length | 134 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 643707897 |
|---|
| Product | 6,7-dimethyl-8-ribityllumazine synthase |
|---|
| Protein accession | YP_002565500 |
|---|
| Protein GI | 222479263 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0054] Riboflavin synthase beta-chain |
|---|
| TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0242566 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCTCGC TGGGACTGGT GGTGGCGCGG TTCAACGACT CCGTCACGGA GCCGATGGCC
GAGGCCGCCC GCGAGGCGGC CACCGACCGC GACGCCGTCA TCGTCGACGA AGTGAGCGTG
CCGGGAGCGT ACGACAGCCC GCTGGCCGCC GACCGGCTCG CGCGCCGAGA CGACGTCGAC
GCCGTCGCGG TGGTCGGCGC CATCGTCACC GGCGACACCG ACCACGACCA CGTGATCGCG
AGCGCGACCG CCGACAAGCT CACGCAGGTG AGCCTCGACC GCGACACCCC CGTCACGTTC
GGCGTGAGCG GCCCGGGGAT GTCCGGCGCG GAGGCGCGCG AGCGGATCGA CAAGGGCGCG
GACGCGGCAG AGGCCGCGAT CGACCTCGCG GACGAACTCG ACTGA
|
|---|
| Protein sequence | MVSLGLVVAR FNDSVTEPMA EAAREAATDR DAVIVDEVSV PGAYDSPLAA DRLARRDDVD
AVAVVGAIVT GDTDHDHVIA SATADKLTQV SLDRDTPVTF GVSGPGMSGA EARERIDKGA
DAAEAAIDLA DELD
|
|---|
| |