Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0830 |
Symbol | |
ID | 7400796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 824862 |
End bp | 825398 |
Gene Length | 537 bp |
Protein Length | 178 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643707896 |
Product | methionine sulfoxide reductase A |
Protein accession | YP_002565499 |
Protein GI | 222479262 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0225] Peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00401] methionine-S-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0328757 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAATC AGCTCGAAAC CGCGACGCTC GGCGGCGGGT GCTTCTGGTG TACCGAGGCG GCGCTCGAAC AGCTCGCCGG CGTCGAGTCG GTCACGTCCG GCTACGCCGG GGGCCACGTC GAGAATCCGA CTTATAAAGG AGTCTGCTCC GGGAACACCG GCCACGCCGA GGTCGTCCAA GTGGAGTTCG ATCCCGACGT GATCGCCTAC GACAAGATTC TGGAAGCCTT CTTCGAGGTC CACGATCCGA CGCAGCTCAA CCGACAGGGC CCGGACGTTG GGTCCCAGTA CCGCTCGATC GTCCTCACCC ACGACGAGGA ACAGCGCGAG GTCGCCGAGG CGTACGTCGA GGCGCTCGAC GAGGAGTACG ACGACGACGT GGTGACCGAG ATCGAGCCGC TGGAGACGTT CTACCGCGCC GAGGAGCATC ACCAGGACTA CTTCGCGAAG AACCCCGACG ACGCCTACTG CACCTTCCAC GCGAAGCCGA AGATGGAGAA GGTCCGCGAG AAGTTCGAGG CGAAGGTCGC GAAGTAG
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Protein sequence | MSNQLETATL GGGCFWCTEA ALEQLAGVES VTSGYAGGHV ENPTYKGVCS GNTGHAEVVQ VEFDPDVIAY DKILEAFFEV HDPTQLNRQG PDVGSQYRSI VLTHDEEQRE VAEAYVEALD EEYDDDVVTE IEPLETFYRA EEHHQDYFAK NPDDAYCTFH AKPKMEKVRE KFEAKVAK
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