Gene Hlac_0830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0830 
Symbol 
ID7400796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp824862 
End bp825398 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content64% 
IMG OID643707896 
Productmethionine sulfoxide reductase A 
Protein accessionYP_002565499 
Protein GI222479262 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0328757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAATC AGCTCGAAAC CGCGACGCTC GGCGGCGGGT GCTTCTGGTG TACCGAGGCG 
GCGCTCGAAC AGCTCGCCGG CGTCGAGTCG GTCACGTCCG GCTACGCCGG GGGCCACGTC
GAGAATCCGA CTTATAAAGG AGTCTGCTCC GGGAACACCG GCCACGCCGA GGTCGTCCAA
GTGGAGTTCG ATCCCGACGT GATCGCCTAC GACAAGATTC TGGAAGCCTT CTTCGAGGTC
CACGATCCGA CGCAGCTCAA CCGACAGGGC CCGGACGTTG GGTCCCAGTA CCGCTCGATC
GTCCTCACCC ACGACGAGGA ACAGCGCGAG GTCGCCGAGG CGTACGTCGA GGCGCTCGAC
GAGGAGTACG ACGACGACGT GGTGACCGAG ATCGAGCCGC TGGAGACGTT CTACCGCGCC
GAGGAGCATC ACCAGGACTA CTTCGCGAAG AACCCCGACG ACGCCTACTG CACCTTCCAC
GCGAAGCCGA AGATGGAGAA GGTCCGCGAG AAGTTCGAGG CGAAGGTCGC GAAGTAG
 
Protein sequence
MSNQLETATL GGGCFWCTEA ALEQLAGVES VTSGYAGGHV ENPTYKGVCS GNTGHAEVVQ 
VEFDPDVIAY DKILEAFFEV HDPTQLNRQG PDVGSQYRSI VLTHDEEQRE VAEAYVEALD
EEYDDDVVTE IEPLETFYRA EEHHQDYFAK NPDDAYCTFH AKPKMEKVRE KFEAKVAK