Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0826 |
Symbol | |
ID | 7400792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 822065 |
End bp | 822730 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643707892 |
Product | translation initiation factor IF-6 |
Protein accession | YP_002565495 |
Protein GI | 222479258 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1976] Translation initiation factor 6 (eIF-6) |
TIGRFAM ID | [TIGR00323] translation initiation factor eIF-6, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00606754 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.97826 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTACGGG CGACCTTCAC CGGCTCGTCG TACGTGGGCG TGTTCGCCCG CGCGATCGAC GACCTCCTGT TGGTTCGGCC GGACGTCGAC GAGGAGCTCG CCGACGCACT CGGCGAGGAA CTGGGCGCGG AGCCCCTCCT CACGACCGTT GGCGGCGCCA ACACCGTCGG ATCCCTCGCG ACGGGCAACG AGAACGGAGT TCTCGTCTCC GCGCGGGCCA CCGAGCGAGA GCAGTCGCGG ATCGCCGAGG CCGCTGACTG CGAGGTGGGC GAGCTTCCCG GCGAGATCAA CGCGGCCGGG AACGTCGTCC TCGCGAACGA CTACGGTGCG TACGTCCACC CGGACCTCCC GCGCGAGTCG ATCGTGACGA TCAGAGAGAC CCTCGGCGTC CCCGTGGTCC GTGGCGATCT CGGCGACGTG CGGACGGTCG GCACCGCTGC GGTCGCCAAC AACACGGGCG TGCTCTGTCA CCCCAAATCG ACCGAATCGG AGCTCCAAGC GGTCGAGGAG GCGCTCGACG TGCGCGCCGA TCTCGGGACG ATCAACTACG GCGCGCCGCT CATCGGCTCC GGGCTTATCG CCACCGACGA AGGATACGTC GTCGGCGAGG ACACCACCGG TCCCGAACTG GGTCGGATCG AGGAGACGCT CGGCTTCATC GACTGA
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Protein sequence | MLRATFTGSS YVGVFARAID DLLLVRPDVD EELADALGEE LGAEPLLTTV GGANTVGSLA TGNENGVLVS ARATEREQSR IAEAADCEVG ELPGEINAAG NVVLANDYGA YVHPDLPRES IVTIRETLGV PVVRGDLGDV RTVGTAAVAN NTGVLCHPKS TESELQAVEE ALDVRADLGT INYGAPLIGS GLIATDEGYV VGEDTTGPEL GRIEETLGFI D
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