Gene Hlac_0796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0796 
Symbol 
ID7400761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp798145 
End bp798978 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content71% 
IMG OID643707861 
Productprotein of unknown function DUF833 
Protein accessionYP_002565465 
Protein GI222479228 
COG category[S] Function unknown 
COG ID[COG3332] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.985351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGTACGC TCACGCTCGC GTGGCGGACG TTCGGTGACG CGCCGATCGC GATCGCCGCG 
AACCGCGACG AGGCGCTGAA CCGACCGTCC GAGCCCCCGG CACTCCGCGA GGCCGGCCGC
GGAGACGGCG ACGACGACGG TAGCTACGTC GCCCCCCGCG ACGCCGAGGC CGGCGGGACG
TGGATCGGGC TCTCCGCGTC GGGGGTCGTC GCCGCGGTCA CGAACCGCTG GCTCGACGCC
GACCGCGAGA GCGACCGGTC CCGCGGTCTG CTCGTCCGCG ACTGTCTGGA GGCCGACTCC
GCGGAGGCGG CCGTCAGAAC GGTCGAACGC GACCTCGAAA CTCGGTCGTA CGACGGCTTC
AATCTCGTGC TTGCCGACGA CGCCGCGGCG TTCCTCCTCT CGTACGACGG TCGATTGGCT
ATCACCCGCC TCGATCCTGG CGTCCACGTG GTCGGCAACG TTGGGGGCGT GGTCAACGGC
GTCGAGCGCT TCGCGATCCC TGACCGGCGA CGGGAGTTCG GTACGGAACG CGCCGACAGT
GCGCGGGCGG TTGCGGCCGC GCTGGTTCCC AAACCCGGCG AATCAGGCGT GGAGTGGCTC
GACCGCGCAA GCGAAACGCT CGCAGATCAC GAGTACGGCG CCTGCCTCCA CGGCGACGAT
TTCGGCACGC GGTCGTTCAC GCGGATCCGG ACCGCTCCCG ATTTCGAGCC GGCATCCGAG
TTCGCGTACG CCGACGGCCC GCCCTGCGAA ACGCTCGCTG AGCCGGTTCC GCTGCCGGCG
GGGTTCGGAT CGGGCGGATC GAGCGGATTG GGCGGATCGG ATGGATCGGC GTAG
 
Protein sequence
MCTLTLAWRT FGDAPIAIAA NRDEALNRPS EPPALREAGR GDGDDDGSYV APRDAEAGGT 
WIGLSASGVV AAVTNRWLDA DRESDRSRGL LVRDCLEADS AEAAVRTVER DLETRSYDGF
NLVLADDAAA FLLSYDGRLA ITRLDPGVHV VGNVGGVVNG VERFAIPDRR REFGTERADS
ARAVAAALVP KPGESGVEWL DRASETLADH EYGACLHGDD FGTRSFTRIR TAPDFEPASE
FAYADGPPCE TLAEPVPLPA GFGSGGSSGL GGSDGSA