| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0719 |
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| Symbol | alaS |
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| ID | 7400192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 732162 |
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| End bp | 734942 |
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| Gene Length | 2781 bp |
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| Protein Length | 926 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 643707785 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_002565391 |
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| Protein GI | 222479154 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.507157 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.398718 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATC TCGAAGCGGA GTACCGCCTC GATTACTTCG AGGAGGAGGG GTTTGAGCGG
AAGGAGTGTC CCTCCTGTGG CGCGCACTTC TGGACCCGCG ACGCCGACCG CGAACTGTGC
GGCGAGCCAC CCTGTGAGGA CTACAGTTTC ATCGACGACC CGGGGTTCCC GGAGGCTTAC
TCACTGTCCG AGATGCGAGA GGCGTTCCTC TCATTCTTCG AGGAGCATGG CCACGAGCGA
ATCGACCCGT ATCCGGTCGC CGCGAACCGC TGGCGCGACG ACGTACTCCT GACGCAGGCG
TCGATTTACG ACTTCCAGCC GCTCGTCACG TCGGGACAGA CCCCGCCGCC CGCGAACCCC
CTCACCATCT CACAGCCCTG TATCCGGATG CAGGACATCG ACAACGTGGG GAAGACGGGC
CGCCACACGA TGGCCTTCGA GATGATGGCC CACCACGCGT TCAACACGCG CGAGGAGGTC
GCCGAGGACG AGTACGCCTA CCACGGCGAG GTGTACTGGA AAGACGAGAC TGTTGAGTAT
TGCGACAAGC TGTTCGAGAG CTTGGGCGCG GATCTAGAGG ATATCACCTA CATCGAGGAC
CCGTGGGTCG GCGGCGGGAA CGCCGGCCCC GCCATCGAGG TCATTTATAA GGGAGCCGAG
CTGGCGACGC TCGTCTTCAT GTGCATGGAG CGGGACCCCG ACGGCGACTA CGAGATGAAG
GACGGGCACA CGTACTCCTT TATGGACACG TACATCGTCG ACACCGGGTA CGGGCTCGAA
CGGTGGACGT GGATGAGTCA GGGGACGGCG ACGGTGTACG AGGCCGTCTA CCCCGACGCG
ATCGACTTCC TCAAGGAGAA CGCGGGGATT GAACACACGG AGGCAGAACA GAAGCTCGTC
CACCGGGCGG CGAAGCTCTC CGGCCGACTC GACATCGACG ATGTCGACGA TGTGGAGGCC
GCCCGCGGCG AGATCGCCGA TCGGCTCGAC GTCGATGTCA ACCGGCTCCG TGAGCTGGTC
GAACCGCTCG AATCGATCTA CGCGATTGCC GACCACTCGC GGACGCTCGC GTACATGTTC
GGCGACGGGA TTGTCCCCTC GAACGTCGGG ACGGGCTACC TCGCCCGGAT GGTCCTGCGG
CGCACGAAGC GGCTCGTCGA CGAGATCGGG ATCGACGCCC CGCTCGACGA GCTGGTCGAC
ATGCAGGCCG AGCGGCTCGG CTACGAGAAC CGCGACACGA TCCGCGAGAT CGTCCGCACC
GAGGAGCGGA AGTACCGCAA GACGCTCGAA CGCGGCTCCC GAAAGGTCGA ATCGCTCGCG
GACGAGTACG CCGGCACGGA CGAACCGATC CCAACGGAGG TGCTCTTGGA GCTGTACGAC
TCCCACGGGA TTCAGCCGGA CATGGTTGCC GACATCGCCG CCGAGCGAGG CGCGACCGTC
GACGTGCCGG ACGACTTCTA CGCGCTCGTC GCCGACCGGC ACGAGGAGGC GGACGGCGAC
GAGGCGGCAG CCGAGCGCGA CGACCGCTTC GACGATCTCC CCGAGACGGA GAAGCTGTTC
TACGACGACC AAGGACGCAC CGAGTTCGAG GCGGTCGTCC TCGACGTGTT TGAGCTCGAG
GAGGGATACG ACGTGGTCTT AGACCAGACG ATGTTCTATC CCGAGGGCGG CGGCCAGCCG
GCCGACAGGG GCCAGCTCAC CGCCGGCGAG ACGACCGTCG ACGTGGTCGA CGTACAGGAG
CGCAACGGCG TCGTGCTCCA TCGCACCGAT GCCGACCCCG GGAAGGGAGA GTTCGTCCGC
GGGCAGGTCG ACGGCGACCG CCGTGACCGG CTCCGCGCGC ACCACACCGC GACCCACCTG
ATCGGCCACG CGGCTCGCGA GGTGCTCGGC AATCACGTTC GACAGGCGGG CGCACAGAAA
GGAATCGACT CCTCCCGGCT CGACATCCGC CACTTCGAGC GGATCACTCG CGAACAAGTC
AAAGAGATCG AGCGCGTCGC AAACGCGCTC GTCCGCGACG ACGTGCCGGT GCGACAGGAG
TGGCCCGACC GCAACGAGGC GGAGTCCGAA CACGGCTTCG ACCTCTATCA GGGCGGCGTC
CCGCCGGGAA CGAACATCCG CCTGATCCAC GTCGGCGACG AGGACGTGCA GGCCTGTGCC
GGCACCCACG TCGAGCGCAC CGGCGAGATC GGCGCGGTGA AAGTGCTGAA GACGGAGCCC
GTCCAAGACG GCGTCGAACG GATCGTGTTC GCGGCGGGCG GTGCCGCCGT CGAGGCGACC
CAGCGCACGG AAGACGCGCT GTACGACGCG GCCAGAGCCC TCGACGTCGA CCCGCTCGAC
GTGCCCGAAA CGGCCGAGCG GTTCTTCGAG GAGTGGAAGG GGCGCGGCAA AGAGATCGAG
TCGCTCAAAG AGGAGCTTGC GGCGGCGCGT GCGTCCGGCG GCGCCGACGC AGAGGAGGTC
GAGATCGGCG GCGTGACCGC GGTGATACAG CGGCTCGACG GCGACGCGGA CGAGCTGCGC
GCGACCGCGA ACGCTCACGT CGACGACGGG AAGGTGGCGG TCGTCGGCAG CGGGGCAGAC
GGCTCCGCGA GCTTCGTCGT CGGTGTCCCC GATGGTGTCG ACGTGAACGC CGGACAGGTG
GTCTCGGAGC TCGCCGCCCG CGTCGGCGGC GGCGGCGGTG GCCCGCCGGA CTTCGCGCAG
GGGGGCGGCC CGGACGCGGA CGCGCTCGAC GACGCGCTCG ACGCGGCACC GGACGTTCTT
CGCAGCCTTC AGGAGGCCTG A
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| Protein sequence | MSDLEAEYRL DYFEEEGFER KECPSCGAHF WTRDADRELC GEPPCEDYSF IDDPGFPEAY
SLSEMREAFL SFFEEHGHER IDPYPVAANR WRDDVLLTQA SIYDFQPLVT SGQTPPPANP
LTISQPCIRM QDIDNVGKTG RHTMAFEMMA HHAFNTREEV AEDEYAYHGE VYWKDETVEY
CDKLFESLGA DLEDITYIED PWVGGGNAGP AIEVIYKGAE LATLVFMCME RDPDGDYEMK
DGHTYSFMDT YIVDTGYGLE RWTWMSQGTA TVYEAVYPDA IDFLKENAGI EHTEAEQKLV
HRAAKLSGRL DIDDVDDVEA ARGEIADRLD VDVNRLRELV EPLESIYAIA DHSRTLAYMF
GDGIVPSNVG TGYLARMVLR RTKRLVDEIG IDAPLDELVD MQAERLGYEN RDTIREIVRT
EERKYRKTLE RGSRKVESLA DEYAGTDEPI PTEVLLELYD SHGIQPDMVA DIAAERGATV
DVPDDFYALV ADRHEEADGD EAAAERDDRF DDLPETEKLF YDDQGRTEFE AVVLDVFELE
EGYDVVLDQT MFYPEGGGQP ADRGQLTAGE TTVDVVDVQE RNGVVLHRTD ADPGKGEFVR
GQVDGDRRDR LRAHHTATHL IGHAAREVLG NHVRQAGAQK GIDSSRLDIR HFERITREQV
KEIERVANAL VRDDVPVRQE WPDRNEAESE HGFDLYQGGV PPGTNIRLIH VGDEDVQACA
GTHVERTGEI GAVKVLKTEP VQDGVERIVF AAGGAAVEAT QRTEDALYDA ARALDVDPLD
VPETAERFFE EWKGRGKEIE SLKEELAAAR ASGGADAEEV EIGGVTAVIQ RLDGDADELR
ATANAHVDDG KVAVVGSGAD GSASFVVGVP DGVDVNAGQV VSELAARVGG GGGGPPDFAQ
GGGPDADALD DALDAAPDVL RSLQEA
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