| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0700 |
|---|
| Symbol | |
|---|
| ID | 7401835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 716048 |
|---|
| End bp | 717211 |
|---|
| Gene Length | 1164 bp |
|---|
| Protein Length | 387 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643707766 |
|---|
| Product | phosphoribosylaminoimidazole carboxylase, ATPase subunit |
|---|
| Protein accession | YP_002565372 |
|---|
| Protein GI | 222479135 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
|---|
| TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.081372 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGATCA CTCTGCCGGG ACCCACGCTC GGCGTCGTCG GCGGCGGCCA ACTGGGTCGC
ATGATCGGTG AAGCGGTCGC GCCGCTCGGC GTCGATATCA TCGTATTGGA CCCGACGCCC
GGCTGTCCGG CCAGCCCCGT CGTCAGCGAC CAGATCGTCG CTGGCTTCGA CGACCCAGAG
GGGATCCGCG AACTGGCGAG CCGAGCCGAC GCCCTGACGT TCGAGATCGA GTTGGCTGAC
CCGGACCTGA TGGCCGAGGC CGCCGCCGAA CACGACGTAC CCGTCCACCC CGACCCGGAC
ACGCTCCGTA CCATTCAGGA CAAGCTCGTT CAGAAGGAGG CGCTGGTCGA CGCCGGGATC
CCCGTCCCCG AGTTCGTCGC GGTCGCCACC GCCGAGGGGC TCGAACGCGT CGTCGAGGAG
TACGGCGGCG TCATGCTGAA GGCCCGCGAG GGCGGGTACG ACGGCCGCGG GAACGTACCT
GTCGACGAGC CCGCGGACGC CGCCGACGCG CTCGACGAGA TCGGCGGCGC CGCGATGGCC
GAGGAGTTCC TCGACTTCGA GCGCGAGATC GCCGTGATGG GGCTGAAGGG GGCCGACGGC
GAGACGCGGA CCTACCCGGT CACCGAGACG ATTCACCGCG AGGAGATCCT CCGCGAGAGC
GTCGCGCCGG CCCGGACGGA CGACGCGGTC GTCGCCGAGG CCGAGTCGGT CGCGCGCGAC
GTGCTCGACG TGCTCGACGG CCGGGGCGTC TTCGGGATCG AGCTGTTCGA GACCCGCGAC
GGCGAGGTGC TCGTCAACGA GATCGCGCCG CGGCCGCACA ACTCCGGCCA CTGGACCATC
GAGGGCGCGC GCACCTCGCA GTTCGAGAAC CACGTCCGGG CGGTCCTCGG GTGGCCGCTC
GGGTCGACCG ACCTCGTCGC GCCGGCGGTC ACAGCGAACG TGCTCGGGGA TGTCGAGGAG
ACGCAGCCCG CGGCGCTGTC GGGCGTTGAG GAGGTTCTCG CGGCGCCCGA GGCCGACGTA
CACTGGTACG GGAAAGACGA CGTGCGCCCG CTTCGGAAGA TGGGGCACCT GACGGCGACG
GACCGTGATG CTAACGCCGA TCGCGACGCC CTGCTCTCCC GATCGCGAGA CCTCCGGGAC
GGGCTGACGT TCCGGAACGC GTAG
|
|---|
| Protein sequence | MTITLPGPTL GVVGGGQLGR MIGEAVAPLG VDIIVLDPTP GCPASPVVSD QIVAGFDDPE
GIRELASRAD ALTFEIELAD PDLMAEAAAE HDVPVHPDPD TLRTIQDKLV QKEALVDAGI
PVPEFVAVAT AEGLERVVEE YGGVMLKARE GGYDGRGNVP VDEPADAADA LDEIGGAAMA
EEFLDFEREI AVMGLKGADG ETRTYPVTET IHREEILRES VAPARTDDAV VAEAESVARD
VLDVLDGRGV FGIELFETRD GEVLVNEIAP RPHNSGHWTI EGARTSQFEN HVRAVLGWPL
GSTDLVAPAV TANVLGDVEE TQPAALSGVE EVLAAPEADV HWYGKDDVRP LRKMGHLTAT
DRDANADRDA LLSRSRDLRD GLTFRNA
|
|---|
| |