Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0686 |
Symbol | |
ID | 7401821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 703630 |
End bp | 704163 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643707752 |
Product | transcriptional regulator, XRE family |
Protein accession | YP_002565358 |
Protein GI | 222479121 |
COG category | [K] Transcription |
COG ID | [COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 |
TIGRFAM ID | [TIGR00270] conserved hypothetical protein TIGR00270 |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCAGT GTGAGATGTG TGGCGCCGAC GAGGCCTCGC TGACGACGAC GAAGGTCGAA GGCGCCGAAC TGGAGCTGTG TAGCTCGTGT ACGGACTTCG GTACCGAGGT CCGCGACGAG TCCACCGGCT CCGGCGGCAG CAAGTACTCC ACGAGTTCGA GTAGCGGGAC GTCCTCCGGG TCGTCATCCG GCTCCTCGGG CGGATCGTCC GGATCGTCGG GTGGCTCGAC GCGTCCGCGC GACATGTTCG ACAACATGGA CGAGATCGCC ACCGACTACG ACGACCGGAT CCGCAACGCC CGCGAGTCCC GCGGGCTCAG CCAGGAAGAG CTGGCCGACC AGCTCAACGA GAAGGCGAGC CTCATCCGTA AGCTGGAGCG CGGCGACACG CTTCCCACCG ACGATATCCA GCGGAAACTG GAGAGCGAAC TCGACATCAC TCTCGTCGAG GGCGAGTCGG CCGACGACGC CGACTGGGAC AGCGGCGACG CCGGGACGAT GACGCTCGGC GACGTGGTCA AGCGGAAAGA CTGA
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Protein sequence | MPQCEMCGAD EASLTTTKVE GAELELCSSC TDFGTEVRDE STGSGGSKYS TSSSSGTSSG SSSGSSGGSS GSSGGSTRPR DMFDNMDEIA TDYDDRIRNA RESRGLSQEE LADQLNEKAS LIRKLERGDT LPTDDIQRKL ESELDITLVE GESADDADWD SGDAGTMTLG DVVKRKD
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