| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0670 |
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| Symbol | |
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| ID | 7401805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 686354 |
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| End bp | 687715 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643707736 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_002565342 |
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| Protein GI | 222479105 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00590114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAGCGACA ACGACGCGGC CGCTGAATCC CCTCTGAGTC CCTCGGTCCG GCGCGTGAGC
GACTGGGACG CCGACCGTCT CGCTGGCCTC GCGGTCGAAC ACGGCACCCC CCTCTACGTG
CAGGACCTCG ACCGCGTCCG CGAGAACAGC GAGCGCCTGC GCGAGGCCTT TCCGGACGCC
GACGTGCGGT ACGCGGTGAA GGCCCACACC GGTCGGGCCG TGCTGGAGGC CGTCCGCGAG
GCGGGCCTCG ACGCCGAGTG TGCCTCTGCC GGCGAGGTGG ACCGCGCGCT CGCAGCCGGC
TTCGGCGGCG ATCGCCTCCA CTACACCGCG GTCAACCCGC CCGCCCGCGA CCTCGATTAC
GTCGTCGGCG TCGCCGAGGC GGAGCCGGAC CTCACGATCA CTGTCGGCGC GGTCGACACC
CTCGACCGGC TGGCCGAGCG AGGCTACGAC GGGCGGGTCT GCGTCCGAGT GAACCCCGGC
GTCGGCGCGG GCCACCACGA GAAGGTCCGG ACCGGCGGCG CGGCGAAGTT CGGGATCCCA
TACGACCGGG CCGCCGAGGC AACGCGAGAC GCGGCCGAGC GCTTCGACGT GGTCGGAATC
CACGCGCACG CTGGCTCCGG GATCGACCCG GACCAGCTCG ACAGCCACCG CGAGATGGTG
ACACGGATGG GCGGACTGGC GCGGGATCTG ACCGACCCGG ACGAGGGCGG CGTGGCCCCC
GTCGACATCG AGTACGTCGA TGTCGGCGGC GGCTTCGGCG TCCCTTATAA AGAGGACGCG
CCGGCGCTCG ACCTACCGGC GGTCGCCGAG GCGACGCGGG AGGCGGTCGC GCCGCTCCCT
GCGGGTGTCG ATCTCGCGAT CGAGCCCGGG CGGTACGTCG TCGCCGACGC GGGCGTCCTC
CTGACGCGCG TCAACACCGT GAAGCCAACG CCGGACGAGC GCGTCGTCGG CGTCGACGCC
GGGATGACGG ACCTGCTGCG CCCGGCGATG TACGACGCCT ACCACCCGAT CCGGAACCTC
GGGGGCGGGC GAGAGAGCGA CGGGAGCGAT GCCCCCGCCA TCGACGACCG GTCGGCAACC
CCTGTCACGG TCGCCGGACC TATCTGTGAG ACCGGCGATA CGCTCTGTAC AGACCGAGCG
CTCGCCGACC CGGTACGCGG GGACCTCCTC GCGGTCGGGA TCGCGGGCGC GTACGGATAC
GAAATGGCAA CCCAATACAA CTCACGACCG CGGCCGCCGG AGGTCGCACT CGACGACGGG
ACTGCAGCGA TCGTCCGCCG CCGGGAGACA CTCGACGACC TGACGACGGT CGAGCGGGAC
GCGAACCGGA ACCGAGCCGA CCGAACGGAG GCGGGCCGAT GA
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| Protein sequence | MSDNDAAAES PLSPSVRRVS DWDADRLAGL AVEHGTPLYV QDLDRVRENS ERLREAFPDA
DVRYAVKAHT GRAVLEAVRE AGLDAECASA GEVDRALAAG FGGDRLHYTA VNPPARDLDY
VVGVAEAEPD LTITVGAVDT LDRLAERGYD GRVCVRVNPG VGAGHHEKVR TGGAAKFGIP
YDRAAEATRD AAERFDVVGI HAHAGSGIDP DQLDSHREMV TRMGGLARDL TDPDEGGVAP
VDIEYVDVGG GFGVPYKEDA PALDLPAVAE ATREAVAPLP AGVDLAIEPG RYVVADAGVL
LTRVNTVKPT PDERVVGVDA GMTDLLRPAM YDAYHPIRNL GGGRESDGSD APAIDDRSAT
PVTVAGPICE TGDTLCTDRA LADPVRGDLL AVGIAGAYGY EMATQYNSRP RPPEVALDDG
TAAIVRRRET LDDLTTVERD ANRNRADRTE AGR
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