Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0668 |
Symbol | |
ID | 7401803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 684669 |
End bp | 685460 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 643707734 |
Product | dihydrodipicolinate reductase |
Protein accession | YP_002565340 |
Protein GI | 222479103 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0289] Dihydrodipicolinate reductase |
TIGRFAM ID | [TIGR00036] dihydrodipicolinate reductase |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.314853 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00503816 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGAGCGGCG ACTCCTTGTC TATCGCCGTC ACCGGCGCCG GCGGTCGGAT GGGCCGTGAA GTGATCTCGG CCGCCGCCGA CCGCGAGGGC GTCGCCGTTT CAGTCGCGGT CAACCGCACC CCGACCGACC CCGTGGCGGG GGTCGCAGTC GAGGACGCCG ACCGCCTCGA CGAGCTGCTC GCGGCCGCGG AACCCGACGC GCTCGTCGAC TTCACCGGTC CCGAATCGGC GGTCGCGTAC GCCGAGATCT GTGCGGACGC GGGCGTGGCG ATGGTCACGG GGACAACCGG GTTCGCGGAC GCGCAGCTCG ACGGCCTCCG GGCCGCAAGC AAGGCGGTAC CCGTGCTCAA GGCGTCGAAC TTCGCGCGCG GCGTCGCCGC GCTCCGGCGC GCGGTCCGCG AGGCCGCCGC CGCGCTCCCC GGTTACGACG TGGAGCTGAC GGAGACGCAC CACAACGCCA AGCGCGACGC CCCCTCGGGC ACCGCGAAGT CGATCCTCGA CGACGTGGAG TCTGTCCGCG ACGACCTCGA CGAGCGCGTC CACGGGCGCG AGGGCGACGC GCCGCGCGAG TCGAACGAGA TCGGCGTCCA CGCCCGACGC GCGGGCGACG TGACCGGCGA GCACGAGGTG CTGTTCGCCG GCAATCGCGA GGCGGTCGAG CTCACTCACC GCGCCGGCGA CCGCGGCGTG TTCGCCGAGG GGGCGCTCGA CGCCGCCGAC TGGCTCGCCG ACCGCGAGCC CGGCTGGTAC GCGTTCGGCG ACGTGCTGGA CGCCGGCGGC GCCGGAGAAT AA
|
Protein sequence | MSGDSLSIAV TGAGGRMGRE VISAAADREG VAVSVAVNRT PTDPVAGVAV EDADRLDELL AAAEPDALVD FTGPESAVAY AEICADAGVA MVTGTTGFAD AQLDGLRAAS KAVPVLKASN FARGVAALRR AVREAAAALP GYDVELTETH HNAKRDAPSG TAKSILDDVE SVRDDLDERV HGREGDAPRE SNEIGVHARR AGDVTGEHEV LFAGNREAVE LTHRAGDRGV FAEGALDAAD WLADREPGWY AFGDVLDAGG AGE
|
| |