Gene Hlac_0633 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0633 
Symbol 
ID7401768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp653366 
End bp654505 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content64% 
IMG OID643707699 
ProductABC transporter related 
Protein accessionYP_002565305 
Protein GI222479068 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATGG CACGAGTCAC GCTCGACACA CTCCGAAAGG AGTTCGACCG GGGGACCATC 
GTCGCCGTCG ACGACATCGA TCTGGAGATC GAGGACGGCG AGTTTGTGAC CGTTGTCGGG
CCGTCGGGCT GCGGGAAGAC GACCACGCTC CGGATGGTCG CGGGACTGGA GGAGCCAACG
TCGGGCGCCG TTCGGTTCGA CGACGAGGAC GTCACCGAGG TTCACGCGAA GGAGCGCCCG
GTCGCGATGG TGTTCCAGAA CTACGCGCTG TACCCCCACA AGACGGTTCT GGAAAACATG
GCGTTCGGGC TCAAGATGAG CACCGACATG ACCGCGGAGC AGCGACGCGA GCGCGTGACG
GAGATGGCCG AGATGATGGG GATCGAGGAT CTGCTCGACG ACAAGCCGGA CGAGCTCTCC
GGCGGACAGA AACAGCGCGT CGCCCTCGGC CGCGCCATCG CCCGCGAGCC CGAAGTGTTC
CTGTTCGACG AGCCGCTCTC GAACCTCGAC GCCAAGCTCC GCACCGAGAT GCGCGCGGAG
ATTCAGAAGC TCCAGAAGGA GTTCGGCGTC ACCGCGATGT ACGTTACCCA TGACCAAGAA
GAGGCGATGA CGATGGGCGA CCGCCTCGCC ATCTTGAACG ACGGGAAGCT CCAGCAGGTC
GGGAAGCCCA CCGAGGTGTA CGAGAACCCG GTCAACAAGT TCGTCGCCGG CTTCATTGGT
TCGCCGTCGA TGAACTTCAT CGACGTGGAT GTCGAGACCG ACGGCTCGTC GGCGACGATC
CACGACGACG CGTCAGGGCT CGCGTTCGAG CTCAGCGACG AGTACGTCGC GGGTCACGAG
CTGGAGAACG CCCCCTACAC GCTCGGAATC CGGCCCGAGA ACATTCGGAT CGTGGAGAAT
CCGACCGGCG ACGAGACGCT CACCTCGACC GTCGAGGTCG TCGAGCCGAT CGGCTCCGAC
AACTACGTCC ACCTCACGAT CAACGAGGAC TTTCTCGCGC GCTCGACCCC GGACGTCCTG
CCCGAGACCG GCGACGAGGT GGGCGTGGTG TTCGAGGAAA CGAACATTCA CCTGTTCGAC
GCGGAGACCG GCGAAGACGT GTTCCTAACC GACGAGGAGA TCGCGGCTGC AGTGGCCTGA
 
Protein sequence
MEMARVTLDT LRKEFDRGTI VAVDDIDLEI EDGEFVTVVG PSGCGKTTTL RMVAGLEEPT 
SGAVRFDDED VTEVHAKERP VAMVFQNYAL YPHKTVLENM AFGLKMSTDM TAEQRRERVT
EMAEMMGIED LLDDKPDELS GGQKQRVALG RAIAREPEVF LFDEPLSNLD AKLRTEMRAE
IQKLQKEFGV TAMYVTHDQE EAMTMGDRLA ILNDGKLQQV GKPTEVYENP VNKFVAGFIG
SPSMNFIDVD VETDGSSATI HDDASGLAFE LSDEYVAGHE LENAPYTLGI RPENIRIVEN
PTGDETLTST VEVVEPIGSD NYVHLTINED FLARSTPDVL PETGDEVGVV FEETNIHLFD
AETGEDVFLT DEEIAAAVA