Gene Hlac_0627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0627 
Symbol 
ID7401762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp645096 
End bp645569 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content70% 
IMG OID643707693 
Productprotein of unknown function DUF35 
Protein accessionYP_002565299 
Protein GI222479062 
COG category[R] General function prediction only 
COG ID[COG1545] Predicted nucleic-acid-binding protein containing a Zn-ribbon 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA ACGAAGCGAC CGACACTGCG ACCGATACCG CGACCGACAC CGACGACCAG 
ACGGACAGCG CCGAACCGGC CTTCGAGGCC GCCGAGTACG CGGACGGCAC CGTCACGTAC
CCGCCTCACA CCGTGAGCCC GAACGGCGCC GAGCGCGTCG GGACGGTCGA CCTCCGGGAG
TACGGAGGGC GGGTCCTCAC GTGGACGACC TCGATGGCGA CGCCCCCGGG CGTTCGCGAG
CCAAACACCC TCGCCATCGT CGAGTTCGAC ATGAACGACG AGTACGACGG GCCGGCGGTC
CGCGCGCTCG GACAGATCGC CGAACGCGAG GACAGCTCTG GGGAGACCTT CGACGTCGAC
ATCGGCGACC GGGTCGAGCC CGTCTACGCC GACGAACTCC GCGAGCCGGG CGCCGGGATC
CGCGAGCCCG AGAGCCAGGA CTGGGACGGG TTCCGATTCC GTCCGGTCGA GTAG
 
Protein sequence
MSDNEATDTA TDTATDTDDQ TDSAEPAFEA AEYADGTVTY PPHTVSPNGA ERVGTVDLRE 
YGGRVLTWTT SMATPPGVRE PNTLAIVEFD MNDEYDGPAV RALGQIAERE DSSGETFDVD
IGDRVEPVYA DELREPGAGI REPESQDWDG FRFRPVE