Gene Hlac_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0620 
Symbol 
ID7401674 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp638661 
End bp638939 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content66% 
IMG OID643707686 
ProductRNA polymerase dimerisation 
Protein accessionYP_002565292 
Protein GI222479055 
COG category[K] Transcription 
COG ID[COG1761] DNA-directed RNA polymerase, subunit L 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00678824 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTGC GGGTCATCGA GAAAACCGAC ACGGAACTCC GCATCGAGAT CGCCGGCGAG 
GACCACACCT TCATGAACGT GCTGAAGGGC GTCCTGCTGG AGACCGACGA CGTCGCAGCC
GCGACCTACG ACATGAACCC CGAGCAGTCC GGTGGTCAGA CGGAACCGGT ACTGACGGTG
AAATCCGAGT CCGGTGACCC GCTCGACGTG CTCGCCGAGG GAGCGGAGTC GATCACCGAC
CGCACCGGCG CGCTGCGCGA CGCCGTGAAG GCCGCCTGA
 
Protein sequence
MELRVIEKTD TELRIEIAGE DHTFMNVLKG VLLETDDVAA ATYDMNPEQS GGQTEPVLTV 
KSESGDPLDV LAEGAESITD RTGALRDAVK AA