Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0620 |
Symbol | |
ID | 7401674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 638661 |
End bp | 638939 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643707686 |
Product | RNA polymerase dimerisation |
Protein accession | YP_002565292 |
Protein GI | 222479055 |
COG category | [K] Transcription |
COG ID | [COG1761] DNA-directed RNA polymerase, subunit L |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00678824 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACTGC GGGTCATCGA GAAAACCGAC ACGGAACTCC GCATCGAGAT CGCCGGCGAG GACCACACCT TCATGAACGT GCTGAAGGGC GTCCTGCTGG AGACCGACGA CGTCGCAGCC GCGACCTACG ACATGAACCC CGAGCAGTCC GGTGGTCAGA CGGAACCGGT ACTGACGGTG AAATCCGAGT CCGGTGACCC GCTCGACGTG CTCGCCGAGG GAGCGGAGTC GATCACCGAC CGCACCGGCG CGCTGCGCGA CGCCGTGAAG GCCGCCTGA
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Protein sequence | MELRVIEKTD TELRIEIAGE DHTFMNVLKG VLLETDDVAA ATYDMNPEQS GGQTEPVLTV KSESGDPLDV LAEGAESITD RTGALRDAVK AA
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