Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0618 |
Symbol | |
ID | 7401754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 636891 |
End bp | 637538 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 643707684 |
Product | 30S ribosomal protein S3Ae |
Protein accession | YP_002565290 |
Protein GI | 222479053 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1890] Ribosomal protein S3AE |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0281131 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGAAC GATCCGTATC CAAGAGCAGA GAACAGAAGC GCTGGTACTC CGTGCTGGCG CCCGAACAGT TCGACCGGCA GGAGCTCGGC GAGACCCTCG CCGAGGAGCC CGACCAGGTC GTCGGCCGTA CGATCACGAC GACGCTGGGC GAGCTGACCG GCGACTCCGG CGCGAACAAC ACGAAGCTCA CGTTCAAGAT CACCGACGTG GGCAGCGACA CGGCCTACAC CGAGTTCATC AAGTACGAGC TCACGCGGGA CTACCTGCGC TCGCTCGTCC GCCGCGGCGC CTCGAAGGTC GAGGCGTCGA TCACGGTGCT GACGACGGAC GACTACCGCA TCCGCGTCCA GCCCGTCGCG CTGACGACGA AGAAGGCCGA TCGCTCGCAG GAGAAGGCGA TCCGCCGCGT CATGATCGAC AAGGTCCACG CGGCCGCCGA GGACCGGACC TTCGAGTCGT TCGTCGACGC CATCGTCGAG GGGAACCTCT CGTCGGCCAT CTACGGCGAC GCGAAGCTCA TCTACCCGCT TCGCCGCGTC GAGATTCAGA AGCTGACGCT GGAGGCGCGG CCGTCCGAGG TCGCCGCCGA AGAGGAGACT GCCGTCGACG TCGACGCCGA CGAAGTGGCT GTCGACGCCG ACGAGTAA
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Protein sequence | MSERSVSKSR EQKRWYSVLA PEQFDRQELG ETLAEEPDQV VGRTITTTLG ELTGDSGANN TKLTFKITDV GSDTAYTEFI KYELTRDYLR SLVRRGASKV EASITVLTTD DYRIRVQPVA LTTKKADRSQ EKAIRRVMID KVHAAAEDRT FESFVDAIVE GNLSSAIYGD AKLIYPLRRV EIQKLTLEAR PSEVAAEEET AVDVDADEVA VDADE
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