Gene Hlac_0618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0618 
Symbol 
ID7401754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp636891 
End bp637538 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content66% 
IMG OID643707684 
Product30S ribosomal protein S3Ae 
Protein accessionYP_002565290 
Protein GI222479053 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1890] Ribosomal protein S3AE 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0281131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAC GATCCGTATC CAAGAGCAGA GAACAGAAGC GCTGGTACTC CGTGCTGGCG 
CCCGAACAGT TCGACCGGCA GGAGCTCGGC GAGACCCTCG CCGAGGAGCC CGACCAGGTC
GTCGGCCGTA CGATCACGAC GACGCTGGGC GAGCTGACCG GCGACTCCGG CGCGAACAAC
ACGAAGCTCA CGTTCAAGAT CACCGACGTG GGCAGCGACA CGGCCTACAC CGAGTTCATC
AAGTACGAGC TCACGCGGGA CTACCTGCGC TCGCTCGTCC GCCGCGGCGC CTCGAAGGTC
GAGGCGTCGA TCACGGTGCT GACGACGGAC GACTACCGCA TCCGCGTCCA GCCCGTCGCG
CTGACGACGA AGAAGGCCGA TCGCTCGCAG GAGAAGGCGA TCCGCCGCGT CATGATCGAC
AAGGTCCACG CGGCCGCCGA GGACCGGACC TTCGAGTCGT TCGTCGACGC CATCGTCGAG
GGGAACCTCT CGTCGGCCAT CTACGGCGAC GCGAAGCTCA TCTACCCGCT TCGCCGCGTC
GAGATTCAGA AGCTGACGCT GGAGGCGCGG CCGTCCGAGG TCGCCGCCGA AGAGGAGACT
GCCGTCGACG TCGACGCCGA CGAAGTGGCT GTCGACGCCG ACGAGTAA
 
Protein sequence
MSERSVSKSR EQKRWYSVLA PEQFDRQELG ETLAEEPDQV VGRTITTTLG ELTGDSGANN 
TKLTFKITDV GSDTAYTEFI KYELTRDYLR SLVRRGASKV EASITVLTTD DYRIRVQPVA
LTTKKADRSQ EKAIRRVMID KVHAAAEDRT FESFVDAIVE GNLSSAIYGD AKLIYPLRRV
EIQKLTLEAR PSEVAAEEET AVDVDADEVA VDADE