Gene Hlac_0616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0616 
Symbol 
ID7401752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp635303 
End bp636583 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content77% 
IMG OID643707682 
Productputative exonuclease RecJ 
Protein accessionYP_002565288 
Protein GI222479051 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.251661 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAG CGACATCCGC CACGCCCGCC CCCGACGCCC TCGCCGACGT CCTCGCGGAC 
GCGCCGTTCG CCCGGCTCGT CGCGACCGAC GACGGTGACG CGGTAGCAGC CGCCGGGCTG
CTCGCGCGGG CACTGCGGGC GGTCGGCACG CCGTTTCAGG TCCGCGTGTC TCGCGATCCG
GTCCCCGACG CCGGCGACGA CGCCGTCGCG GTGACAATTG GCGCGGACCG CGGCCCGCAC
GCGATTCCCG GTTTGGGGCG CCCGGCGAGC ACGGACGCGT TCGCGATAGC GCGCGCGCTC
GGCGTCGACC CCGATCCGGT CGTCGCCCTT GCGGGCGTCG TCGCAGCCGG CTCCGTGCCC
GGTACGGACG GCTCCGGTGA CGCACTGGAG GCGGCCGAGC ACACGGACCG CGTTCGCCGA
CGCCCTGGCG TCGCGCTCCC GACCGTCGAT CTGGCGGACG GGCTCGCGGC CTCGATGCTC
GTTCGGACGT CGTACTCCGG CGATAGCGAG GCCGCGCGCG CAGCGCTCGC GGATCTCGGA
CTTCCGGCCG ACCTCGACGA CGACGCACAC CGGCGACTCG CGTCGCTGGT CGCCGTCGAC
GTTGCGGACG CCGAGGGTGC GAGCACACGG GCCGCCTCTG CGGTCGAGCG CGCGCTCCGC
CCGTACGCCA CGGTCGGAGA CGCGGCACCG TTCGAGACGG TCGGCGGCTA CGCCGACGTG
CTCGACGCGC TCGCCCGCGA GGCTCCCGGT ACGGGAGTCG CGCTGGCGCT CGACAGCGAT
CCGGGCGACG AGCTTCGGGC CGCCGCGCTC GACGCGTGGC GGTCGCACGG ACTCGCCGCG
CACCGCGCGC TCGACGACGC GACGATCGGC CGGTACGACG GCTGTCTCGT CGCGCGCGTC
GCCCTCGCGG GAGGCGACCG CTCGGAGGAG GACGGAGACG CCGCGCCTGA CGCGGCCGCC
GTCCTTCCGA CGGTTGCTCG ACTCGTCCGC GACTTCCGGT CGCCGGAGCC CGTCGCCGTC
GCGGTCGACG AGGCCGCGGG CCGGCTGGCT GCTGCCGCGA CCGGCGGGGG CCGCGCAGCG
GGCGGCGCGA CCGCCGAGCC GATCGGGCTC GGCGACGCCT GCCGGTCGGC GGCAAGCGAG
GTCGGCGGCG ACGGCTGGGG GACCGCCGAC CGTGGCGGGA TCGCAGTCGG CACCGCCGAC
GAGGCGGACA GGATTGAGGA GCGCGAAGCG ACCGACGGCG ACATCACGGG CGCGCTCGCC
GCGCTCAGGG AGGCGCTATG A
 
Protein sequence
MTEATSATPA PDALADVLAD APFARLVATD DGDAVAAAGL LARALRAVGT PFQVRVSRDP 
VPDAGDDAVA VTIGADRGPH AIPGLGRPAS TDAFAIARAL GVDPDPVVAL AGVVAAGSVP
GTDGSGDALE AAEHTDRVRR RPGVALPTVD LADGLAASML VRTSYSGDSE AARAALADLG
LPADLDDDAH RRLASLVAVD VADAEGASTR AASAVERALR PYATVGDAAP FETVGGYADV
LDALAREAPG TGVALALDSD PGDELRAAAL DAWRSHGLAA HRALDDATIG RYDGCLVARV
ALAGGDRSEE DGDAAPDAAA VLPTVARLVR DFRSPEPVAV AVDEAAGRLA AAATGGGRAA
GGATAEPIGL GDACRSAASE VGGDGWGTAD RGGIAVGTAD EADRIEEREA TDGDITGALA
ALREAL