Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0612 |
Symbol | |
ID | 7401748 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 631186 |
End bp | 631869 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643707678 |
Product | PHP domain protein |
Protein accession | YP_002565284 |
Protein GI | 222479047 |
COG category | [R] General function prediction only |
COG ID | [COG0613] Predicted metal-dependent phosphoesterases (PHP family) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.138908 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTTATCGG TCGAGCTGCA CACGCATTCC GCGCTGTCCT ACGACGGGCG CGATCCGGTC GACCTCCTCT TGGAGCAGGC GGCGGCGGTC GGACTGGACG CGCTCGCCGT TACGGACCAC GACGAGATCG ACGCCAGCAT CGAGGCGGCC GAGAAGGCCC CCGACTACGG GCTCGTCGGC ATCGTTGGCA TGGAGGTGAC GAGCGCGGCC GGCCACATCC TCGCGTTCGG CATCAGCGAG CGCGTCGAGA GCGGGCTCCC GTATGACGAG ACGCTCGATC GGATCCGCGA CCAGGGCGGG ATCGCGGTCA TTCCCCATCC CTTCCAGAAG TCCCGCCACG GCGTCGCCGC TCACATCACC GACGAACAGT TGGCGAGCGC CGACGCCCTC GAAGTGTACA ACTCCCGGCT GTTCACCGGG CGATCGAACC GGCAGGCCGA GAAGTTCGCG ATCCGGAACC GGATTCCGAT GACCGCCGGC AGCGACGCCC ACATCTCGGA GATGGTGGGA CAGGCCGTAA CCGAGGTCGG CGCCGACGAC CGTTCGGCCG AGGCGATCCT CAACGGGATC GCCGACGGAC GAACCAGCGT CGTCGGGAAA CGAACCCCGT GGCGCGTCTC GCTCCGCCAG TTCAGCGGCG GCGCCAAGCG CCGCGCGCTC CGCGCGCTGA ACGCGCTCCG CTGA
|
Protein sequence | MLSVELHTHS ALSYDGRDPV DLLLEQAAAV GLDALAVTDH DEIDASIEAA EKAPDYGLVG IVGMEVTSAA GHILAFGISE RVESGLPYDE TLDRIRDQGG IAVIPHPFQK SRHGVAAHIT DEQLASADAL EVYNSRLFTG RSNRQAEKFA IRNRIPMTAG SDAHISEMVG QAVTEVGADD RSAEAILNGI ADGRTSVVGK RTPWRVSLRQ FSGGAKRRAL RALNALR
|
| |