Gene Hlac_0602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0602 
Symbol 
ID7401738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp622464 
End bp623240 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content72% 
IMG OID643707668 
Productiron/cobalamin ABC transporter periplasmic substrate-binding protein 
Protein accessionYP_002565274 
Protein GI222479037 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATC CACGCGTCGT CTCGCTGGCA CCGAGTGCGA CAGCGACCGT AACCGCTCTC 
GGCGCCGCCG AGATCCTGGT CGGCGTCACG AACCACTGCG ATCTCTCGGA AGACGCGGGC
GCCACGCACG GGATGGATTC TCCCGCTGCC CTCGGCGGGT GGCTGAACCC CGACCTCGAC
CGCGTCGCCG ACCTCGATCC CGACGCCGTC CTCACCAGCG ACGGGCTCCA GAGCGATCTC
GCCGACGACT GCCGCGAGCG CGGGTTCGCC GTTCGGCACC GCGAGCCCGC GACGCTCGAC
GAGGTAGTCG CGACCTTTGC CGCCCGCGGT GCGGACGTGG GGCGATCTGA GGCCGGCGAC
CGTCTCGCTG CCGAGGCTCG GGAGCGACTC GACCGGATCG CCGGCGCGGT CGTGGATCGC
CCGCGCCCGA TCGTCTACTG TGAGGAGTGG TCCGACCCGC CGATGGCCGC CGGCAACTGG
GTCCCCGACG CCGTGCGCGC CGCCGGCGGC CGATACCCCT TCGTCGACCC CGGCGAGCGC
TCCCGCGAGG TCGACCTCGC CGCCGTCGAG CGGGCCACCC CCGACCACGT CGTCGTCCAC
GTCTGCGGCC ACGGCGATCG GATCGATCCC GCGACCGTCG AGGAACGCGA CTGGGCCGTC
GACGCCCCCG TCCACGTGAT CGACGACTCC CTCTTGAACC AGCCGAGCCC CGCGCTGATC
GACGGCGTCG AGCGGCTGGC GAGGCTGTTC CATCCCGAGA TCGAGACGTA TTCGTAG
 
Protein sequence
MSDPRVVSLA PSATATVTAL GAAEILVGVT NHCDLSEDAG ATHGMDSPAA LGGWLNPDLD 
RVADLDPDAV LTSDGLQSDL ADDCRERGFA VRHREPATLD EVVATFAARG ADVGRSEAGD
RLAAEARERL DRIAGAVVDR PRPIVYCEEW SDPPMAAGNW VPDAVRAAGG RYPFVDPGER
SREVDLAAVE RATPDHVVVH VCGHGDRIDP ATVEERDWAV DAPVHVIDDS LLNQPSPALI
DGVERLARLF HPEIETYS