Gene Hlac_0578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0578 
Symbol 
ID7401713 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp595925 
End bp596755 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content68% 
IMG OID643707643 
Productaldo/keto reductase 
Protein accessionYP_002565250 
Protein GI222479013 
COG category[R] General function prediction only 
COG ID[COG0656] Aldo/keto reductases, related to diketogulonate reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.113038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.346661 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGAG ATCTGCAGTC TTTCGACGTA CCGACCAGCG ACGGAATGCC GGCGCTCGGG 
CTCGGGACGT GGGAGAACGA CGATCCCGAA CAGTGTACCG AGTCCGTCAA AACCGCCCTA
GAGATGGGGT ACCGCCACGT CGACACGGCC CAGATATACG GCAACGAGGC GGCCGTCGGA
AAGGGACTTT CGGCCGCCGA CGTCGACCGG GACGACGTAT TCCTCGCGAC GAAAGTGTGG
ATCGACAACC TCGCGCCCGA GGACGTGGCC GCCTCGACCC GCGAGAGCCT CCAGAAGCTC
GACACCGAGT ACGTCGACCT GCTGTACGTC CACTGGCCGG CCGGCGCGTA CGGCCCCGAG
GAGACCCTGC CCGCGTTCGC GGAGCTCCGC GACGACGGCC TGATCGACCG GATCGGGGTC
TCGAACTTCG AGCCGGAGCA CCTCGACGCC GCGACCGACG CCCTCGGCGA GGCGCCGTTC
GCGAATCAGG TGGAGTGTCA CCCGCTGCTC CGGCAGGAAG AACTGCGCGA GTACGCCGAC
GCCAACGGCG TCGAACTCGT CGGGTACTCG CCGCTCGCTC GCGGGAAGAT CCTCGACGAG
CCGACCGTCG GCGAGATCGC CGAGAAGCAC GGCGTCAGCG CCGCGCAGGT GAGCCTCGCG
TGGCTCCGCG AGAAAGGGGT CACCGCCATC CCGAAGGCGA CCGGCGAGGA CCACATCGCC
GACAACTGGG CGAGCCTCGG GCTCGAACTG GACGACGAGG ATATCCAACA AATCGACGGC
CTCGGCCGGA CCGACCGCCA ACTGAACCCC GACTTCGGCC CGAACTGGTA G
 
Protein sequence
MSRDLQSFDV PTSDGMPALG LGTWENDDPE QCTESVKTAL EMGYRHVDTA QIYGNEAAVG 
KGLSAADVDR DDVFLATKVW IDNLAPEDVA ASTRESLQKL DTEYVDLLYV HWPAGAYGPE
ETLPAFAELR DDGLIDRIGV SNFEPEHLDA ATDALGEAPF ANQVECHPLL RQEELREYAD
ANGVELVGYS PLARGKILDE PTVGEIAEKH GVSAAQVSLA WLREKGVTAI PKATGEDHIA
DNWASLGLEL DDEDIQQIDG LGRTDRQLNP DFGPNW