Gene Hlac_0576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0576 
Symbol 
ID7401711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp592460 
End bp593299 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content72% 
IMG OID643707641 
Producthypothetical protein 
Protein accessionYP_002565248 
Protein GI222479011 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0856861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.814109 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGAC TCATGGACAT CTCGACGCTT CTCGGGACCG ACGTCCTGCT GTTCTTCGTC 
ATCGGGCTGC TCGGCGGCGC CCACTGTATC GGGATGTGCG GCCCGCTCGT CACGGTGTAC
GCCGGACGGA TGCGTGAGGG GAGCGAGCGC GCCGACGGCG GAGCGCCTAC CGCCGGCGCG
ACCGACACCC GACGCGGGAG TCACTTGACC ACGTACGAGG TCCGCCAGCA CGCGCTGTTC
AACCTCGGGC GGGCCGCGAG CTACGCGACC ATCGGCGCGG CGCTCGGCGC GCTCGGCGGA
GCCGTCCTCG TCACGACCGC GACGGTGACG GGCGCTGCGG AGGCGGTCCG CGGCGTCGTC
GGGATCGGCG TCGGTGCAGC CGTGATCCTC ATCGGGATCC GGTACGTCCT CGGCGGCGCG
ACCGGCGGGA TCCACCTCCC GGGGCTCGAC CGCGTCACCG GCTGGCTCAC GGGCCACGTC
GACCGGCTCG CCAACGGGCC CGGGATCGTC GGGCTCGGTG CGGTCCACGG GCTGCTCCCG
TGTCCGATCC TCTACCCGGC GTACCTCTAC GCGTTCGCCA GCGGCTCCGC CGTCAGCGGG
GCGCTCGCGC TTGCGGCGCT CGGCGTCGGC ACGATGCCCG CCGTCTTCCT CTACGGCACC
GTCATCGAGA GCGTCGACGC GGTCCACCGC CGCCGCGTCC ACCGCCTGCT CGGCGTCGCC
TTCGTGGCGC TCGGCTACGT CCTGTTCGCG CACGGACTGA TGGCGATCGG CGTCCACGTA
CCGCATCCGA GCTTGCCCTT CTGGAACCCA ATCGACATCG CGGGCGCGGG GGGCCGCTAA
 
Protein sequence
MIRLMDISTL LGTDVLLFFV IGLLGGAHCI GMCGPLVTVY AGRMREGSER ADGGAPTAGA 
TDTRRGSHLT TYEVRQHALF NLGRAASYAT IGAALGALGG AVLVTTATVT GAAEAVRGVV
GIGVGAAVIL IGIRYVLGGA TGGIHLPGLD RVTGWLTGHV DRLANGPGIV GLGAVHGLLP
CPILYPAYLY AFASGSAVSG ALALAALGVG TMPAVFLYGT VIESVDAVHR RRVHRLLGVA
FVALGYVLFA HGLMAIGVHV PHPSLPFWNP IDIAGAGGR