Gene Hlac_0570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0570 
Symbol 
ID7401705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp587849 
End bp588274 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content71% 
IMG OID643707635 
ProductUspA domain protein 
Protein accessionYP_002565242 
Protein GI222479005 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.932953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGACG CGATCCTCTG TCCCACGGAC GGCAGCGCTG GAAGTGACGC CGCGGTCGAG 
CAGGCCTGCG ACCTCGCTGA ACTGACGGGC GCACGGATCC ACGCGCTGTT CGTCGTCGAC
GAGGGGATCG CGGGCGCTGA CGAGTGGGAC CTTGTCGTCG ACCGGGAGGA AGAGCGGGGC
GAGCGCGCGC TCGACGCGGT TGCCGAGGCG GCCGCGGACC GCGGTATCGA GGTCGAGCGC
CACCTCCGAC GCGGTCGCCC GCACGAGGAG ATCCTCGACG CCGCGACCGA CTACGGGGTC
GACCTGATCG TGATGGGGAC CCACGGCCGC ACCGGACTCG GCCGGTTCGT CACGGCGGGC
TCGGTCGCTG AGCGGGTCGT GCGACACAGC AAGCTCCCGG TGTTGACGGC GCACATCGGT
GACTGA
 
Protein sequence
MYDAILCPTD GSAGSDAAVE QACDLAELTG ARIHALFVVD EGIAGADEWD LVVDREEERG 
ERALDAVAEA AADRGIEVER HLRRGRPHEE ILDAATDYGV DLIVMGTHGR TGLGRFVTAG
SVAERVVRHS KLPVLTAHIG D