Gene Hlac_0564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0564 
Symbol 
ID7401699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp585948 
End bp586214 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content69% 
IMG OID643707629 
ProductRibosomal L37ae protein 
Protein accessionYP_002565236 
Protein GI222478999 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1997] Ribosomal protein L37AE/L43A 
TIGRFAM ID[TIGR00280] ribosomal protein L37a 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGG ACAAGGCACG AAGCACCGGC AGCGCGGGCC GATTCGGCGC CCGCTACGGC 
CGGGTCTCCC GCAAACGAGT CCAGGATATC GAAGAGGAGA TGCAGAACGC GACCGTCGAC
GGCGACGACG TCAAGCGCGT GGGTACCGGC ATCTGGGTCA ACGAGGAGAC CGGCGAGACG
TTCACCGGCG GTGCGTACCG CCCCGAGACG CCCGGCGGTC GCACCGTCCG CCGTTCCATC
CGCGCCGCGC TCGCCGACGA GGAGTAA
 
Protein sequence
MAEDKARSTG SAGRFGARYG RVSRKRVQDI EEEMQNATVD GDDVKRVGTG IWVNEETGET 
FTGGAYRPET PGGRTVRRSI RAALADEE