| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0547 |
|---|
| Symbol | |
|---|
| ID | 7401682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 570998 |
|---|
| End bp | 571816 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643707612 |
|---|
| Product | imidazole glycerol phosphate synthase subunit HisF |
|---|
| Protein accession | YP_002565219 |
|---|
| Protein GI | 222478982 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0102288 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACTCA CGAAGCGGAT CATCCCCTGT ATCGACGTCG ACCTCGACGC CGACGGGGAC
GCGGCGGTGT ACACGGGCGT CAACTTCGAG AATCTGGAGT ACACCGGCGA CCCGGTCGAG
CTAGCGAAGA AGTACAACGC CGCGGGCGCC GACGAGTTCG TCTTCCTCGA CATCACCGCG
AGCGCGGAGG GTCGCGAGAC GATGCTCGAC GTGGTGAACG CGGTCGCCGA CGAGTGTTTC
ATCCCGCTGA CGGTCGGCGG TGGCATCCGC ACCAAGGCCG ACATCAAGGA GACGCTCCGC
GCGGGCGCGG ACAAGGTGTC GATCACGACC GGCGCCTTAG AACGCCCCGA GCTCATCGAG
GAGGGCGCGG CGGCGTTCGG CAGCCAGTGT ATCGTCATCT CGATCGACGC CCGTCGCCGG
TACGACGACG CGGGCGAGCA CTTCTACGAG GACGACGACG GCGAGACGGT GTGGTTCGAG
TGCACCAAGA AGGGCGGCCG CGAGGGCACC GGCATCGACG CCGTCTCGTG GGCGAAAGAG
GCCGAGGAGC GCGGCGCCGG CGAGCTGTTC GTCAACTCTA TCGACAAAGA CGGAACGAAG
GACGGCTACG ACATCCCGCT GATGAAAGCG GTGTGTGACG CCGTCTCGAC GCCCGTTATC
GCCTCCTCGG GCTGCGGGAG CCCAGAGGAT ATGTACGACG TGTTCACCGA GGCGAACGCC
GACGCGGGGC TCGCCGCCTC TATCTTCCAC TTCGGTGACT ACTCGATCGA GGAGACGAAG
AAGTACCTCG ACGAGCGCGG CGTGCCTGTG CGGTTGTAG
|
|---|
| Protein sequence | MGLTKRIIPC IDVDLDADGD AAVYTGVNFE NLEYTGDPVE LAKKYNAAGA DEFVFLDITA
SAEGRETMLD VVNAVADECF IPLTVGGGIR TKADIKETLR AGADKVSITT GALERPELIE
EGAAAFGSQC IVISIDARRR YDDAGEHFYE DDDGETVWFE CTKKGGREGT GIDAVSWAKE
AEERGAGELF VNSIDKDGTK DGYDIPLMKA VCDAVSTPVI ASSGCGSPED MYDVFTEANA
DAGLAASIFH FGDYSIEETK KYLDERGVPV RL
|
|---|
| |