| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0543 |
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| Symbol | |
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| ID | 7401678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 564523 |
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| End bp | 565644 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643707608 |
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| Product | transcriptional regulator, TrmB |
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| Protein accession | YP_002565215 |
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| Protein GI | 222478978 |
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| COG category | [K] Transcription |
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| COG ID | [COG1378] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0100454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGACC GGACGCTGAA CGATCTTCTC CGCCGGTTCG GGCTCTCGGA CAAGGAGGTC
GACACGTACC TCAGTCTCTT GGCGCACGGG GAGGCGAAGG CGAGCACCGT CGCAGACGCC
GCCGGTGTGT CGAAGCGCTA CGTCTACAGC GTGAGCGAGT CGCTCGCTGA GCGCGGCTTC
GTCGAGGTAA ACGACCACGT CGTGCCGACG ACGATCCGCG CGAACCCGCC GGACGAGGTC
ATCAACCGCC TCCGTTCGGA CGTCGACGCG ATCCGCCCCG GGTTAGAGGA GCGCTTCTCG
CGGGTGGAGC GGCAGACCGA GCAGTTCGAG GTGATCAAGT CCCGCGTGAC GGTGATAAAG
CGGATCCGGT CGCTGCTCGC GGACGCGGAC TCGGAGGTGA CGCTGTCGAT CGCGGCCGGT
CACCTCCCCG AGATCCGCGA CTCCCTCGTC GAGGCGGTCG ACCGCGGCGT CTTGGTACTG
CTCATCGTCT CCGGCGCCGA CGAGGTGCCG GACGACATCG ATGAGGGACT CGACGGCGTC
GCCAGCGTCG TCCGGACGTG GCGCGAGGCG ATGCCGACGC TGCTCACGGT CGACTCCGCG
GCCGGCGTCG TCGCCCCGCC CGAACTGCTG CGCCGGTCCA ACACCGACCG GCAGGCGATC
CACTTCTCAC AGGAACAGCT CGCGCCGGTG ATCGTCGGCT CGTTCCTCGG GAACTACTGG
CCGGCCGCGA ACGAGATCGC GACCGCGGCG CCCGCGCCGC TCCCGGTCGA GTACGCGAAC
TTCAGACACA CCGTACTGCA GGTGACCCTG CGCCTCCGCG TCGGCGAGAT TCCCCGCGTC
ACCGTGGGCG GCCGGTGGAC TGACCGCGAC GAGCCGGCCG AGATCAGCGG TCGCGTCGTG
GAGTCGAAAC AGGGAATGGT GGAGCCGACG ACCAACGAGT TCCCAGTCCA ACACTCGCTC
GTCGTCGAGA CCGACGACGG CAAGACCGTC ACGGTGGGCG GGCAGGGGGC CTTCGTTGAG
GACATCGAGG CCGACCTCGT TCGGATCGAG GAAGACGACG GAGACCACGA GGAGGCGGAC
GCGGGAGAGT CCGACGAGGC GGACGGAGCA GACGGCGTCT GA
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| Protein sequence | MDDRTLNDLL RRFGLSDKEV DTYLSLLAHG EAKASTVADA AGVSKRYVYS VSESLAERGF
VEVNDHVVPT TIRANPPDEV INRLRSDVDA IRPGLEERFS RVERQTEQFE VIKSRVTVIK
RIRSLLADAD SEVTLSIAAG HLPEIRDSLV EAVDRGVLVL LIVSGADEVP DDIDEGLDGV
ASVVRTWREA MPTLLTVDSA AGVVAPPELL RRSNTDRQAI HFSQEQLAPV IVGSFLGNYW
PAANEIATAA PAPLPVEYAN FRHTVLQVTL RLRVGEIPRV TVGGRWTDRD EPAEISGRVV
ESKQGMVEPT TNEFPVQHSL VVETDDGKTV TVGGQGAFVE DIEADLVRIE EDDGDHEEAD
AGESDEADGA DGV
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