Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0527 |
Symbol | |
ID | 7400408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 547173 |
End bp | 550754 |
Gene Length | 3582 bp |
Protein Length | 1193 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643707592 |
Product | chromosome segregation protein SMC |
Protein accession | YP_002565199 |
Protein GI | 222478962 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR02169] chromosome segregation protein SMC, primarily archaeal type |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.534964 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACATCA CAGAAGTGGT TTTAGACGGA TTCAAGAGCT TCGGACGAAC GACGAGGATC CCCTTTTACG ACGACTTCAC AGTCGTCACC GGGCCGAACG GCTCGGGAAA GTCGAACATC ATCGACGGGG TTCTCTTCGC GCTCGGCTTA GCGCGTACCC GCGGGATCAG AGCCAAGAAG CTCACGGACC TGATCTACAA CCCCGGCCAC GACGGCGGCG AAGCCTCGGA CGGTCCGAAC GAGGCGTCGG TGACGGTGGT CCTGTCCAAC GAGGACGGGA CTCTCGACCG CTCGCAGGTC GTCTCCGCCG CCGGCACGGA GAACGTCGGC GGCGTCTCCG AGATCACGAT CAAACGGCGC GTCAAAGAGA CTGAGGACAA CTACTACTCG TACTACTACC TCAACGGTCG GTCGGTGAAC CTCTCGGACG TGCAGGACCT GCTTGCCGCC GCCGGCGTCA CGCCAGAGGG GTACAACGTC GTGATGCAGG GCGACGTGAC CGAGATCATC AACATGACCC CCTACCAGCG CCGGGGGATC ATCGACGAGA TCGCGGGCGT CGCCGAATTC GACGAGAAGA AGGAGGCCGC CTACGAGGAG TTGGAGACCG TCGAAGACCG GATCGAGGAG GCCGATCTCC GGATCGGCGA GAAGCAGGAC CGACTCGATC AGCTGGCCGA CGAGCGCGAG ACCGCCCTGC AGTATCAGCA GTTCCGCGAC GAACTCGAGG AGTACCGCGG CTTTCTCAAA GCCTCCGAGC TGGAAGAGAA GCGCGAGACG CTCGCAGGCG TTGAGGAGGA CATCGACGAC GACGAGACCG AACTCGAGGA ACTCCGCGCC GAGCTTGACG CCAGGCAGGG CAAACTCACA CGGCTGGAGG AGGACTTAGC CGACCTCAAC CACGAGATCG AGACCAAAGG CGAGGACGAA CAGATCGAGA TCCGGTCGGA GATCGAGGAG GTGAAAGGCG AGATTTCGCG GTTGGAGGAC AAAATCGAGG CCGCCGAGGA GCGCGCCGCG GAGGCCGAGA CCGAACGTCG CGACGCGTTC GTTCAGATCG ATCGCAAAGA AGAGACGATC GAAGAGCTCG AATCCGAGAT CCGCGAGGCG AAAGTCGAGA AGGCCTCCGT GAAATCGGAG ATCGCCACGA AGCGCTCGGA GCTCGCCGAC GTCGAGGCCG AGATCGAGGG CGCCGACACC GAGTTCGACG AGCTGAAAGC CGAACTCGCG GAGAAGAAGG AGGCGATCGA GTCGCTACGG GAGGAGAAAA ACGGGCTCCA GCGCGAGAAG GACCGCCTGC TCGACGAGGC CCGTCGGCGC TCGAACGCGG TGAGCGAGGC GCGGACCGAC TTGGAGGACG CCCGCGAGTC GATCCCGGAG CACAAAGCGC GGATCTCCGA GCTGCACAGC GAGCTCGACA AGGCCACGAA GAACGAGGAG ACGATCGAGG ACGCGGTCGC TGACCTGTTC GCGGAGAAGG CCGAAACGAG CGAGCGGTTA GAGGCGATCG AAGAGGATCT CCGCGAGAAA CAGAACGAGT ATGCGAAGCT GGAGGCCGCC GCCGACCAGC GCGGCGACAC CTCGTGGCCC CGCGCGGTGA CCGAGGTGAA GAACGGTGGG ATCGACGGGG TCCACGGCGC GGTCGGCGAG CTCGGATCCG TCGAGGCCGA GTACGCCGAG GCCTGCGAGA CGGCCGCCGG CGGCAGACTC GCGAACGTCG TCGTCGACGA TGACGGCGTG GGCTCGACGT GTATCGACTA TCTCAAGCAG CGCAATGCGG GGCGGGCGAC GTTCCTCCCC ATCACGAAGA TGGACAACCG GAGCCTCCCG CGGAAACCCT CGGTTCCGGG CGTCGTCGAC TTCGCGCGCA ACCTCGTCGA CTACGACAGC GAGTACGAGT CGATCTTCTC GTACGTGCTG GGCTCCACGC TGATCGTCGA GGACATGGCG ACCGCACGGG ACCTGATGGG CGACTACCGG ATGGTGACGC TCGACGGCGA CCTCGTCGAG AAGTCCGGTG CGATGACCGG CGGGTCGGGC GGCGGCTCCC GCTACGCGTT CACGAAGTCC GGCGGCGGAA AGCTCGAACG GCTCGCGACT GACATCTCGG AGCGAGAAGA TGAACGGCAG GCGCTACAGG CCGAAGTCGA CGAGCTGGAA GACGACATCG ACGACGCCCG CGACCGGAAG GCCGACGCCG CAGAGCGCGT CCGGTCGCTG GAGGCGGACG TCGAGCGCGC CGAAGACGAG TTGGCGGACG CCGAGGACCG CATCGACGAG CTCAAAGCGG AGCTGGAGGA TATGGAGGCG GAACGCGAGT CGGTGGACGC GGAGATGACC GAACTCGACG ACGAGATAGA CGATCTGAAC ACGGAGATCG ACGAACTCGA CGGCGAGATC GAGGAGATCG AGACAGAGTT GGCCGACTCG AAGATCCCGG AGCTCTCGGA GCGTGCCGAC GAGATCCGCG GGGAGATCTC GGACCTGGAA GACCGGATGA GTTCGCTCGA CGGGCGGCGC AACGAGCTCG AACTGGAGAA GGGGTACACG GAGGACGCGG TCGACGACCT CCACGACACC GTCGAGACGG CGCAAAATCG GAAGGCCGAG GCCGAAGAAG CGATCGCCGA CCACGAGGTG ACGATAGACG AGAAGGAGGA GACGCTGGAA GCGAAACGCG AGTCGATCGC GGAGCTCGAA GCGGAACTGA CGGAGCTGAA GGCCGACCGC GAGGACCTCC GAGAGGCGAT CACCGAGGCG ACCCGCGAGC GCGACGAGCA GCGCTCGCTC GTCTCGGAGG CGGAGTCCGA CTTGGAAGAC CTCACCGACC GCCGCGACCG GCTGGCGTGG GAGATCGACG AGCTGGAGTC GCAGGTCGGC GAGTACGACG CCGACGAGAT TCCGGACCTC GACGAGGTCG AGTCGCGTAT CGAGGAGTTA GAAGAGGAGA TGGCGGCGTT AGAGCCCGTC AACATGCTCG CGATCGACGA ATACGACGAG GTAGAGGAGG CGCTGGAGAC GCTCCAAGAG CGCCGGGACG TCCTCGTCGA GGAGCGCGAC GCGATCGCGG AGCGTATCGA GGGGTACGAG GCCGAAAAGA AGCGGACGTT CATGGAGACG TTCGAGTCGA TCAACGACCA GTTCGAGGAC ATCTTCGCGC GCCTCTCGGC CGGCAGCGGC GAGCTCCTCT TGGAGAACCC CGAGGACCCG TTCGAGGAGG GGCTGACGAT GAAGGCCCAG CCCGCCGACA AGCCGGTCCA GCGGCTCGAC GCGATGAGCG GCGGCGAGAA GTCGCTGACC GCGCTCTCCT TCATCTTCGC GATCCAGCGG CACAACCCCG CGCCGTTCTA CGCGCTCGAC GAGATCGACG CGTTCCTCGA CGCGGTCAAC GCCGAGCGCG TCGGCGAGAT GATCGAGGAG CTGGCCGAGG AGGCCCAGTT CGTCGTCGTC GGCCACCGCT CTGCGCTTCT GGAACGCTCC GACCGCGCCA TCGGCGTCAC GATGCAGGGC GACAACCTCT CGGCGGTAAC CGGGATGCAG TTCGGCGACG ACGGCGACGA GGAGGTGACG GCGGATGACT GA
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Protein sequence | MHITEVVLDG FKSFGRTTRI PFYDDFTVVT GPNGSGKSNI IDGVLFALGL ARTRGIRAKK LTDLIYNPGH DGGEASDGPN EASVTVVLSN EDGTLDRSQV VSAAGTENVG GVSEITIKRR VKETEDNYYS YYYLNGRSVN LSDVQDLLAA AGVTPEGYNV VMQGDVTEII NMTPYQRRGI IDEIAGVAEF DEKKEAAYEE LETVEDRIEE ADLRIGEKQD RLDQLADERE TALQYQQFRD ELEEYRGFLK ASELEEKRET LAGVEEDIDD DETELEELRA ELDARQGKLT RLEEDLADLN HEIETKGEDE QIEIRSEIEE VKGEISRLED KIEAAEERAA EAETERRDAF VQIDRKEETI EELESEIREA KVEKASVKSE IATKRSELAD VEAEIEGADT EFDELKAELA EKKEAIESLR EEKNGLQREK DRLLDEARRR SNAVSEARTD LEDARESIPE HKARISELHS ELDKATKNEE TIEDAVADLF AEKAETSERL EAIEEDLREK QNEYAKLEAA ADQRGDTSWP RAVTEVKNGG IDGVHGAVGE LGSVEAEYAE ACETAAGGRL ANVVVDDDGV GSTCIDYLKQ RNAGRATFLP ITKMDNRSLP RKPSVPGVVD FARNLVDYDS EYESIFSYVL GSTLIVEDMA TARDLMGDYR MVTLDGDLVE KSGAMTGGSG GGSRYAFTKS GGGKLERLAT DISEREDERQ ALQAEVDELE DDIDDARDRK ADAAERVRSL EADVERAEDE LADAEDRIDE LKAELEDMEA ERESVDAEMT ELDDEIDDLN TEIDELDGEI EEIETELADS KIPELSERAD EIRGEISDLE DRMSSLDGRR NELELEKGYT EDAVDDLHDT VETAQNRKAE AEEAIADHEV TIDEKEETLE AKRESIAELE AELTELKADR EDLREAITEA TRERDEQRSL VSEAESDLED LTDRRDRLAW EIDELESQVG EYDADEIPDL DEVESRIEEL EEEMAALEPV NMLAIDEYDE VEEALETLQE RRDVLVEERD AIAERIEGYE AEKKRTFMET FESINDQFED IFARLSAGSG ELLLENPEDP FEEGLTMKAQ PADKPVQRLD AMSGGEKSLT ALSFIFAIQR HNPAPFYALD EIDAFLDAVN AERVGEMIEE LAEEAQFVVV GHRSALLERS DRAIGVTMQG DNLSAVTGMQ FGDDGDEEVT ADD
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