Gene Hlac_0521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0521 
Symbol 
ID7400402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp542287 
End bp543069 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content71% 
IMG OID643707586 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_002565193 
Protein GI222478956 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.295476 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.801035 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGG CTCGCCGGCG ACGATCCGTT CGCGTCGGGG TCGGAGTCGG GCTCCCGCTC 
GTCGCCGCGG TCGCACTCGT GGCCCTCCTG TTGCGACTGT TCCCCGTGGA CGCGACGAGC
CAGTGGGGAC TCTTTCCCGC TGTCGTCGCC GGCGTCTGCT GGGCCGGACA GCTCTGGTAC
GTCGGCTATG GTCTCGATCC GGGGCGGCTG ACCGGCGGAT TCTGGCGGCG GCTGCTCGGG
CTGGCGAACG TGGTCACGCT CGTTCGGGGC GCGCTGTACG CCGTCGTCGC CGGGTTCGTC
GTCGTGCCGT CCGAGACGGC GCTCGCGTGG GTGCCAGCGC TGTGTTACGG GACCGGCGTC
GCCCTCGACA AGCTCGACGG GATCGTCGCC CGGACGGTCG GTCGACAGAC GGAGCTCGGC
CGCCGGCTTG ACATGGCGTT CGACACGTTC GGGTTCGTCG TCGCGCCGCT GGTAGCGGTG
CTGTGGGGGT TGCTGCCGGT CTGGTACCTC TCGATCTCCG CCGCACGCTA CGTCTTTCGC
GGGGCCGTGT GGCTGCGGCG CGTCCGCGGG CTCCCAGTCG GGGACCTTCC CGACAGCGAC
CTCGGAAAGT ACCTCGCGGG AGTCCAAATG ATATTTGTGA CGATCGCCCT CGCCCCACTG
GCGCCGACGG ATCTCGTCTG GATCCTCGCG CCGGTCGTTC TCGCCCCGTC GCTGGCGGTG
TTCACGCGGG ACTACCTCGC CGTCAGCGGG CGGATCGGAC GGGGCGTCGA CGACGCCCAG
TGA
 
Protein sequence
MAEARRRRSV RVGVGVGLPL VAAVALVALL LRLFPVDATS QWGLFPAVVA GVCWAGQLWY 
VGYGLDPGRL TGGFWRRLLG LANVVTLVRG ALYAVVAGFV VVPSETALAW VPALCYGTGV
ALDKLDGIVA RTVGRQTELG RRLDMAFDTF GFVVAPLVAV LWGLLPVWYL SISAARYVFR
GAVWLRRVRG LPVGDLPDSD LGKYLAGVQM IFVTIALAPL APTDLVWILA PVVLAPSLAV
FTRDYLAVSG RIGRGVDDAQ