Gene Hlac_0518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0518 
Symbol 
ID7400399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp538778 
End bp539647 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content71% 
IMG OID643707583 
Producthypothetical protein 
Protein accessionYP_002565190 
Protein GI222478953 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0309259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCC TCGGGACCGC CTACCTGCGC GGGCTGCAGG CCGTCGGGCG GCGGCTCGAC 
TACGGGACGA ACGTCTTCGA CCGAGAGTGG GACGTTCTCG TCGTCCTCGA CGCCTGCCGG
GCCGACCTGT TGCGCTCGAT CGCGTCCGAT TTCGACTTCT TCGGTCACGT TGAGACGGTC
CGATCGGTCG GCAGCTCCTC CTCGGAGTGG CTGGAGAACA CGTTCGTGAA CCACCCGGAG
ACACCGTGGA CCGTCATGGT GACGGGCAAC ACGTGGACCG ATCGCTACCT CGACGCCACC
GCGTTCGCCG CGCTCGACGA GGTGTGGAAG TACGCCTGGG ACGACGACCT CGGTACCGTG
CCGGCGGCGG CGGTCACCGA TCGCGCCGTC GCGCTGGCCC GCGAGCGCGA CCCCGAGCGG
CTCGTCGTCC ACTACATGCA GCCGCACCAC CCGTTCGTCC CTGACCCGCT CGACGGCGAC
GACGGGCTGG CTCGGACCGG AAGCCACAGC AACGACGGGA ATCCGTGGGT GTCGCTCCGG
CGCGGAGAGG TCTCGACCGA GCGCGTCTGG CGGGCCTACG AGGCGAACCT TCGGCACGTG
CTTAGCGAAG TGGCGACGCT CCTCGACAAC GTCGACGGGC GCGTCGCGGT CACCGCCGAC
CACGGCAACC TCTTCGGCGA GTGGGGGCTG TACGGGCACC CCATGCACAC ACCGGTGCCC
GCCCTCCTCG CCGTCCCGTG GGCGGAGGCG ACGGGCGTCG ACCGCGGGAT CCTCGATCCC
GAACTCGACC CGCCGGAGCC GCTGCCGGTG GGTCGGGTCC ACGGCGAGAC GGGCGAGCGC
GAGCGGCTCG AGGCGCTCGG CTACCTGTGA
 
Protein sequence
MSRLGTAYLR GLQAVGRRLD YGTNVFDREW DVLVVLDACR ADLLRSIASD FDFFGHVETV 
RSVGSSSSEW LENTFVNHPE TPWTVMVTGN TWTDRYLDAT AFAALDEVWK YAWDDDLGTV
PAAAVTDRAV ALARERDPER LVVHYMQPHH PFVPDPLDGD DGLARTGSHS NDGNPWVSLR
RGEVSTERVW RAYEANLRHV LSEVATLLDN VDGRVAVTAD HGNLFGEWGL YGHPMHTPVP
ALLAVPWAEA TGVDRGILDP ELDPPEPLPV GRVHGETGER ERLEALGYL