Gene Hlac_0503 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0503 
Symbol 
ID7400384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp522871 
End bp523845 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content63% 
IMG OID643707568 
Productphosphate ABC transporter, inner membrane subunit PstC 
Protein accessionYP_002565175 
Protein GI222478938 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0573] ABC-type phosphate transport system, permease component 
TIGRFAM ID[TIGR02138] phosphate ABC transporter, permease protein PstC 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.482233 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.348466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGATA GTACCGAGAG TCCCGATCTC CAGCGTCGGA GCGGGCTCAG ACGACTGAAG 
GAGGGAACCT ACGGCGGGCT CTTCGCCGCG TGCGCGGCGA TCACCCTGCT CACGACGGTA
GCGATCTTCG TGACGCTGCT GTCGGACGCG GTGGTGTTTT TCCAAGAGAT ACCGATAACC
GAGTTCCTGA CCGGCACCAA CTGGAGCCCG AACCCGGCCG GCGGCGGGCA GGCGTTCGGC
ATCATCCCCC TGCTGATCGG GACGCTCGTC GTGACGATCA CGGCGGCGTT CATCGCGCTC
CCCCTGGGGA CGCTAACGGC GATTTACCTC AGCGAGTATG CGACCTCGAA CGCGCGCTCG
ATACTCAAGC CACTCTTAGA GATCCTCGCT GGCATCCCGA CCGTCGTGTA CGGGTACTTC
GCGCTGGTGT ACATCACGCC GGCGCTGAAG GCGACGCTGT TCCCGAGTAT GAGCACATTC
AACGCGCTCT CGGCGTCGAT CATGGTCGGT ATCATGACGA TCCCGATGGT GTCGTCGATC
TCCGAGGACG CGATGAGCGC GGTTCCCGAC GACCTTCGGC AGGCCGGGTA CGGGCTCGGC
GCCACGAAGT TCGAGGTGTC GACCGGGATC GTCGTTCCGG CCTCCATTTC GGGGATCTCT
TCCTCGTACA TTCTCGCGGT GTCCCGTGCC ATCGGCGAGA CGATGATCGT CGTCGTCGCG
ATGGGCGCGC AGGCGCGGAT GCCGGCGGTT CGGGAGGCCG CCTTCGGGAT CCCGATCGTC
AACCCCGCCG ATGTTCTCTT GGAGTCCGGG ATGACGATTA CCGTCGCAAT GGTGCAGATC
GCGGGCGGCG ATCTCACAGG TGGGTCGATA CCGTATGATT CGATGTTCGC GCTCGGCCTC
ACGCTGTTCG TGGTGACCCT CGTAATGAAC GTGATCAGTG ATATCATTGC ACAGCGGTAC
CGGGAGGAGT ACTAA
 
Protein sequence
MTDSTESPDL QRRSGLRRLK EGTYGGLFAA CAAITLLTTV AIFVTLLSDA VVFFQEIPIT 
EFLTGTNWSP NPAGGGQAFG IIPLLIGTLV VTITAAFIAL PLGTLTAIYL SEYATSNARS
ILKPLLEILA GIPTVVYGYF ALVYITPALK ATLFPSMSTF NALSASIMVG IMTIPMVSSI
SEDAMSAVPD DLRQAGYGLG ATKFEVSTGI VVPASISGIS SSYILAVSRA IGETMIVVVA
MGAQARMPAV REAAFGIPIV NPADVLLESG MTITVAMVQI AGGDLTGGSI PYDSMFALGL
TLFVVTLVMN VISDIIAQRY REEY