Gene Hlac_0499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0499 
Symbol 
ID7400380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp517656 
End bp518471 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content71% 
IMG OID643707564 
ProductABC transporter related 
Protein accessionYP_002565171 
Protein GI222478934 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.594452 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGAGA TCGAGGGCGT CACGTGTCGG TACGGCGGTG GGACTGAGAA GAGCGGTGAC 
GGCGACGGCA AGGCGGACGG TGACCGCGTC ACCGCCGTCG CCAACGTGAC CCTCTCGATC
CCCGAAGGCG AGTTCCTGAT CGTCGCCGGC GCGAACGGCT CTGGCAAGAC GACGCTCGTC
CGGACGTTTA ACGGGCTCGT GACGCCGGAT TCGGGGACGG TCGCCGTCAA CGGGACCCCC
GTGAGCGACG ACCTCGTCGC GGCCCGGACC GCGGTCGGGA TGGTGTTTCA GGATCCGCGC
GACCAGTTGG TGGCGTCGAC CGTCGGCGCG GACGTGGCAT TCGGCCCGGA GAATCTCGGA
CTCTCCCACG CCGAGATCGA CCGGCGGGTC GCCGACGCGC TCGCCGCGGT GAACATGACC
GGCCGCGAGG ATGATCGGAT CGCGAGCCTC TCTGGCGGCG AGCGCGAGCG CGTCGCGATC
GCGGGTGTGC TCGCGATGGA GCCCGATCAT CTCGTCTTGG ACGAGCCGTT CACCGGGCTC
GACGAGCCGG CCCGGCGGTC GGTACTCGAC CGCCTGCGCG AACTCCGCGC GGCCGGGACG
AGCGTGATCG TCGTCACCCA CGACCTCCGC GACGTGCTCG GGCTCGCCGA TCGGGTGCTC
GGGCTGTCTG CGGGGCGTGT CGCGGTCGAC GCCGCGCCGC GGGAGGCGGC CACGGATCTG
CCGGAACTGG ACGTGCGGGT TCCGGAAGGA GCGTTCGACG ACCGACCTGT GAACACCGGC
GCCGACGACA CCGCCAGCGA TACCGTCGAC TCGTGA
 
Protein sequence
MIEIEGVTCR YGGGTEKSGD GDGKADGDRV TAVANVTLSI PEGEFLIVAG ANGSGKTTLV 
RTFNGLVTPD SGTVAVNGTP VSDDLVAART AVGMVFQDPR DQLVASTVGA DVAFGPENLG
LSHAEIDRRV ADALAAVNMT GREDDRIASL SGGERERVAI AGVLAMEPDH LVLDEPFTGL
DEPARRSVLD RLRELRAAGT SVIVVTHDLR DVLGLADRVL GLSAGRVAVD AAPREAATDL
PELDVRVPEG AFDDRPVNTG ADDTASDTVD S