Gene Hlac_0490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0490 
Symbol 
ID7400371 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp508852 
End bp509871 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content61% 
IMG OID643707555 
Productphosphoesterase RecJ domain protein 
Protein accessionYP_002565162 
Protein GI222478925 
COG category[R] General function prediction only 
COG ID[COG0618] Exopolyphosphatase-related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.185907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.59625 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCCCG TCCATAGGCT CGAAGAGCTC CTCGCCGGCG CCGAGAATCT GATGATAGTC 
TGTCATAACA ATCCGGATCC GGACTGTCTC GCAAGCGCGT TCGCGTTGGG CCGGATCGCG
ATCGCCGTCG GCATCGACGA ACACCACATC CTGTACAGCG GCGATATCTC TCACCAGCAG
AATCGGGCGT TCGTCAATCT CATCGATATC GATCTGAAAC CCTTCGATCC CGCGGCCGTC
CAAGATCGTC CCGAGGAGTC ACTGCTCGCG TTCGTCGATC ACGCGGTTCC GGGGGAGAAC
AATCGGGTTC CGGAGGGGAC CCCGGTCGAT ATCGTGATCG ATCATCATCC GAACGAGGAG
ATCGAGGCAC AATTTATCGA TCACCGCGAG CAGATCGGCG CGACGGCGAC GATTCTGACG
GAGTACGTTC GGGAACTGGA TATCGAGATG GACGCCGCTC TCGGGACGGC CCTGCTGTTC
GCGATCCGTC GCGAGACGCT CGGGTTTCTC CGTGGCGTGA CCAGCGCCGA GTACGACGCT
GCCGGCTGGC TCCACGAACA CGCGGACGGT GCGCTACTTC GGACCCTCTC GACGCCGTCA
GTTACCGGGG CGACCGTCGA TACAATCGCG GAGGCGGTCA GGAACCGGAC CGTGCGTGGC
TCGGTCCTCA TCTCGGGGAT CGGTCGGACG AGTGAGCGTG ACGCGTTACC CCAGGCAGCC
GACTACCTCA CGACCCTGGA GGGCGTCGAG ACTGCGATCG TGTTCGGGAT CGTCAAAGAC
GGGATTCAGA TCTCGGCGCG GTCGACCGAT TCTCGAATCC ACATCGGTAA CGTGCTTGAC
GGGGCATTTT CCGATGTCGG CACCGCTGGC GGCCACCGAG AGATGGCTGG TGGTGAAGTG
CCACTCGGTA TTTTCGCGGA GTATGCGACT GACGACACCC AGTTGTTCGC GATCGTTGAC
CAAGTGATGA GCGCTCGTCT CATCGCCGAA CTCCGTCTCA CGGCAGAGAC GGACACATAG
 
Protein sequence
MHPVHRLEEL LAGAENLMIV CHNNPDPDCL ASAFALGRIA IAVGIDEHHI LYSGDISHQQ 
NRAFVNLIDI DLKPFDPAAV QDRPEESLLA FVDHAVPGEN NRVPEGTPVD IVIDHHPNEE
IEAQFIDHRE QIGATATILT EYVRELDIEM DAALGTALLF AIRRETLGFL RGVTSAEYDA
AGWLHEHADG ALLRTLSTPS VTGATVDTIA EAVRNRTVRG SVLISGIGRT SERDALPQAA
DYLTTLEGVE TAIVFGIVKD GIQISARSTD SRIHIGNVLD GAFSDVGTAG GHREMAGGEV
PLGIFAEYAT DDTQLFAIVD QVMSARLIAE LRLTAETDT