Gene Hlac_0487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0487 
Symbol 
ID7400368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp507366 
End bp508025 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content64% 
IMG OID643707552 
Productcation antiporter 
Protein accessionYP_002565159 
Protein GI222478922 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.700511 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCGCA CCTGGCCGGT CGCCGGAGTC CTGTTCGGTA TCCTGTGGGT ATTCGTTCAG 
GGACCGCCGC TCGCGCCCGA ACCGCTCGTC GGGTCGCTGC TGATCGGTCT CGCGGTCGGC
TTCCCAACGG CCTTCGTCTT CCGGCGTCTG TACGAGGACA ACATGGAGCT CCGTCGATCG
CTTCGCGGGG TCCCGTACGT GTTGTTGTAC GTGCTGACGT TCATTCGGGA GGCGATCGTC
GCCAGTCTCG ACGTCACGTA TCGCGTGCTC GCGCTCTCTA GCCCGTCTGA ACCCGAGGTG
ATCCTCATCC CGCTGCGCGT CCGGACCGAT CTCGGCGTAA CCACTATCGC CAACAGCATC
ACGATGACTC CCGGGTCGCT CACGCTCAAC TACGACCCCG AGGAGAACGC GCTGTACATC
CACGTCATCG ACGGGAGCGA TCCGAAGGAC ATCGTCGACC CGATCCGCAA CTGGGAGAAC
TACGCGCTCA TCATCTTCGA CGAGGAACTA TCGCCGAGCG ATCCCGCGCC GGATTTTGCC
GTCTACCCGC CCGACCGAAC GCATCCTGCC CTCAAACAGG CCGCTCCGGA AACGGGGGAG
GAGACAGAGA CCGATCCGCC GACCGAGGAA GCCACAGGAG GTGACAGGGA TGACCGCTGA
 
Protein sequence
MTRTWPVAGV LFGILWVFVQ GPPLAPEPLV GSLLIGLAVG FPTAFVFRRL YEDNMELRRS 
LRGVPYVLLY VLTFIREAIV ASLDVTYRVL ALSSPSEPEV ILIPLRVRTD LGVTTIANSI
TMTPGSLTLN YDPEENALYI HVIDGSDPKD IVDPIRNWEN YALIIFDEEL SPSDPAPDFA
VYPPDRTHPA LKQAAPETGE ETETDPPTEE ATGGDRDDR