Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0487 |
Symbol | |
ID | 7400368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 507366 |
End bp | 508025 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643707552 |
Product | cation antiporter |
Protein accession | YP_002565159 |
Protein GI | 222478922 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.700511 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCCGCA CCTGGCCGGT CGCCGGAGTC CTGTTCGGTA TCCTGTGGGT ATTCGTTCAG GGACCGCCGC TCGCGCCCGA ACCGCTCGTC GGGTCGCTGC TGATCGGTCT CGCGGTCGGC TTCCCAACGG CCTTCGTCTT CCGGCGTCTG TACGAGGACA ACATGGAGCT CCGTCGATCG CTTCGCGGGG TCCCGTACGT GTTGTTGTAC GTGCTGACGT TCATTCGGGA GGCGATCGTC GCCAGTCTCG ACGTCACGTA TCGCGTGCTC GCGCTCTCTA GCCCGTCTGA ACCCGAGGTG ATCCTCATCC CGCTGCGCGT CCGGACCGAT CTCGGCGTAA CCACTATCGC CAACAGCATC ACGATGACTC CCGGGTCGCT CACGCTCAAC TACGACCCCG AGGAGAACGC GCTGTACATC CACGTCATCG ACGGGAGCGA TCCGAAGGAC ATCGTCGACC CGATCCGCAA CTGGGAGAAC TACGCGCTCA TCATCTTCGA CGAGGAACTA TCGCCGAGCG ATCCCGCGCC GGATTTTGCC GTCTACCCGC CCGACCGAAC GCATCCTGCC CTCAAACAGG CCGCTCCGGA AACGGGGGAG GAGACAGAGA CCGATCCGCC GACCGAGGAA GCCACAGGAG GTGACAGGGA TGACCGCTGA
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Protein sequence | MTRTWPVAGV LFGILWVFVQ GPPLAPEPLV GSLLIGLAVG FPTAFVFRRL YEDNMELRRS LRGVPYVLLY VLTFIREAIV ASLDVTYRVL ALSSPSEPEV ILIPLRVRTD LGVTTIANSI TMTPGSLTLN YDPEENALYI HVIDGSDPKD IVDPIRNWEN YALIIFDEEL SPSDPAPDFA VYPPDRTHPA LKQAAPETGE ETETDPPTEE ATGGDRDDR
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