Gene Hlac_0485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0485 
Symbol 
ID7400366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp505421 
End bp505765 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content63% 
IMG OID643707550 
ProductNADH-ubiquinone oxidoreductase chain 4L 
Protein accessionYP_002565157 
Protein GI222478920 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1006] Multisubunit Na+/H+ antiporter, MnhC subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.374483 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTCG CCCTCGCGGT CGCGGTCGGC GGGCTGTTCG CTGTCGGAAC GTTCCTACTC 
CTACAGCGGG ACCTCGTGCG GGTCGTGTTA GGGGTCGCCG TCGTCTCCCA GGCGACGTTC
GTCTATCTGA TCGCGATGGG GGGCATCGAT GAGGGTGCCC AGAACCTCGT GCCCGTTCTC
GAGGTCCACG GTGGGAAAGT TCCCGAGATC GCCGATCCGG TGGTACAGGC GCTCGTCCTG
ACGGCGATCG TCATCAGTCT CGGAACGACC GCGCTGGCAC TCGTGCTGTC GTATCGCGCC
TACGAGGAGA ACGAGACCAT GGATGTCACG GAGTGGACGA AATGA
 
Protein sequence
MSLALAVAVG GLFAVGTFLL LQRDLVRVVL GVAVVSQATF VYLIAMGGID EGAQNLVPVL 
EVHGGKVPEI ADPVVQALVL TAIVISLGTT ALALVLSYRA YEENETMDVT EWTK