Gene Hlac_0484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0484 
Symbol 
ID7400365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp504925 
End bp505374 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content65% 
IMG OID643707549 
ProductNa+/H+ antiporter MnhB subunit-related protein 
Protein accessionYP_002565156 
Protein GI222478919 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.508236 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACGA CGGCCCGGGT GACCGTTCCC ATCGTGCTCG TCGTCTCGAT CTCGCTGTTC 
TTACAGGGCC ACAACCTGCC CGGCGGCGGC TTCATCGGCG GCGTTCTCAC CACGGCGGCG
TTCGTGCTCA TATACGTCGC CTACGACCTC GACTACCTGG AGTCGGGGGT GCTCGGCCGG
GAGGTTGAGC CCGGTACCAG CGTTTTCGAG CACCGCACGG TCACCGCCTA CCGCCGCACG
CTACTCGCGG GCCTGGTGGT CGTTCTCGGC AGTGGCTTTG CGGGGATGCT CATCGGCGAC
CCGTTCCTGA CCCAGGGGTA CGTCCACGTC GAAGGCATCC CGATTTACCA CGAGGTCGAA
CTCGCGAGCG CGCTCGTGTT CGATCTGGGC GTGTACCTCG TCGTCGTCGG CAGCCTCCTG
ACTATCGTCT CGGTGGTGAG CGGCGAATGA
 
Protein sequence
MQTTARVTVP IVLVVSISLF LQGHNLPGGG FIGGVLTTAA FVLIYVAYDL DYLESGVLGR 
EVEPGTSVFE HRTVTAYRRT LLAGLVVVLG SGFAGMLIGD PFLTQGYVHV EGIPIYHEVE
LASALVFDLG VYLVVVGSLL TIVSVVSGE