| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0469 |
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| Symbol | |
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| ID | 7400349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 486394 |
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| End bp | 487530 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643707533 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_002565141 |
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| Protein GI | 222478904 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.235953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.329223 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGAAG GGTCACCTCG GGACAGGGAG TTACGACGGT ACGAGACGAT TCTCGATTCG
CTCGATGACG CCGTCTACGC CGTCCGTCCC GACGGAACCA TCGCGTACGT CAACGATCGG
TATGCCGAGA TGAAGGGCGT GAGTCGCGAG GCGCTGCTGG GGACGGATAT CTACGACTGG
GTCACGGAGG AAACCGCGGA GAAGGCCACA CAGGTCCGCA ACGAGATGGC CGCGGGCGAT
CGCGACGTCG GCATGGTCGA GTACGAGTTC CTCACGGCAG ACGGGGAGCG ATTCCCAGCG
GAGATGCGCT TCAACAGGGT GACCGGCGAG GAAGGCGAGG AGCTGAACCG CGTCGGCGTC
ATCCGAGACG TCCGCGAGCG GAAGCGGCGC GAGGAGGCGC TCCGCCGCAA GAACGAACGG
CTCGAGGAGT TCGCGAGCAT CGTCTCGCAC GACCTCCGGA ACCCCCTCAA CGTCGCGCAG
GGGCGGCTGG ACCTCGCCCG CGAGGAGTAC GACTCCGAGC ACCTGGAGGT CGTCGCCAAC
GCCCACGAGC GAATGGCGGC GCTCATCGAC GACCTCCTGA CGCTCGCCCG TGACGGCGAG
GGCGTCGAGG AGACGGAGCG GGTTCCCCTC CGCGAACTCG CGGAGGTGTG CTGGGAGAGC
GTCGAGACCG CAGCGGCCTC GCTCCGGATC GAGACCGACC GCGCGATCCG CGCGGACCGG
AGCCGACTCA GACAGCTCGT CGAGAACCTC ATGCGGAACA GCGTGGAACA CGGTCGTTCG
AGAGACGGCG ATACCGTCTC TCGCGATGAC GAAAACTCCG AGACGGAGTT TTCGAACCAT
TCCACGAGCA GCCGGGCAGA GCCCGGCGAC GCGGTCGTGC ACGCCGGCGA GGACGTCACG
GTGACGGTCG GCGACGTCGA GGGGGGCTTC TACGTCGCCG ACGACGGCCG GGGGATCCCC
GAGAGCGACC GCGAGACGGT GTTCGAGACG GGGTACACCA CGAGCGACGA CGGGACCGGG
TTCGGCCTCG AAATCGTCGA GGCCGTCGCG ACGGCTCACG GCTGGGACGT GCGCGTCACC
GACGCCGCGG GCGGCGGCGC CCGGTTCGAG TTCACCGGGG TCGACGTGCT CGACTGA
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| Protein sequence | MTEGSPRDRE LRRYETILDS LDDAVYAVRP DGTIAYVNDR YAEMKGVSRE ALLGTDIYDW
VTEETAEKAT QVRNEMAAGD RDVGMVEYEF LTADGERFPA EMRFNRVTGE EGEELNRVGV
IRDVRERKRR EEALRRKNER LEEFASIVSH DLRNPLNVAQ GRLDLAREEY DSEHLEVVAN
AHERMAALID DLLTLARDGE GVEETERVPL RELAEVCWES VETAAASLRI ETDRAIRADR
SRLRQLVENL MRNSVEHGRS RDGDTVSRDD ENSETEFSNH STSSRAEPGD AVVHAGEDVT
VTVGDVEGGF YVADDGRGIP ESDRETVFET GYTTSDDGTG FGLEIVEAVA TAHGWDVRVT
DAAGGGARFE FTGVDVLD
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