Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0468 |
Symbol | |
ID | 7400348 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 485253 |
End bp | 486299 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643707532 |
Product | beta-lactamase domain protein |
Protein accession | YP_002565140 |
Protein GI | 222478903 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00306027 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.41592 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACGGA TCCAACTCGG CAACACCGTC TTCGAGGGCG AAAACGACGT GTACCTGCTC GACGGCGAGA CGACCGCGCT CGTCGACACC GGCGTCGCGC TCCCGGACGT ACGCGGGGAG TTAGAGGCCG GTCTCGCCGA GTACGGGCTC GGGTTCGCCG ACGTGGACGC AATCGCGCTC ACCCACTGGC ACCCCGACCA CGCGGGACTG GCCGGCGAGA TTCAGGCCGA AAGCGACGCG GACGTGTACG TCCACGAGGC GGACGCGTCG CTCGTCGACG GCAGCGATGC GCCGCTGTTC CTCGATCGCG ACCTCCAGCG CGAGACGTTC GATCGGTGGG GGATGCCGGA GCCCGACCGA GAGCGGCTGA CCGCCTTCTT CGACGCGGTG AGTGCCGACC TCAGCGGTCG GCCCGCCGAC GTGACGACGT TCGGCGACGG CGACGTGATC GACGCCGGCG GCGTCGCCCT CGAAGCGATG CACCTGCCGG GCCACACCGC CGGGCTCACG GGGTTCGCCT TCGACCCGCG CGAGGTCCCC GACCACGAGT CGGTCGGCGG CGCAGACGCA ACAGCAGAGC TGTTCGCGGG CGACGCACTC CTCCCGAAGT ATACCCCGAA CGTCGGCGGC GCGGACGTGC GCGTTGACGG GCCGTTAGCG GCATACGCCG AGAGCCTCGT GCGGATCATC GAGCGCGACT TCGACGCGGC CCACCCCGGC CACCGCGACC GGATCGACGA CCCGAGCCGA CGGGCCGCGA CCATCCTCGA CCACCACCGG CACCGGACTC GGCGGGTGCT CGACGTGCTC GCTGACGAGG GGCCCGCAAC CGCGTGGGAG GTCTCTGCCG CGCTGTTCGG CGACCTCTCG GAGATCCACG TCCTCCACGG CCCCGGAGAG GCGTTCGCAC ACCTCGATCA TCTCGCCGAC GCTGGTATCA TCGAACCCGA CGGGACCGCC TATCGACTGA TCGATCCGGA GCCGGATGTC GACGCGCTGT TTCCGACTAC TCCCCTCGAC GACGCGGTCG ACGGCTCGGA GGCGTAG
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Protein sequence | MKRIQLGNTV FEGENDVYLL DGETTALVDT GVALPDVRGE LEAGLAEYGL GFADVDAIAL THWHPDHAGL AGEIQAESDA DVYVHEADAS LVDGSDAPLF LDRDLQRETF DRWGMPEPDR ERLTAFFDAV SADLSGRPAD VTTFGDGDVI DAGGVALEAM HLPGHTAGLT GFAFDPREVP DHESVGGADA TAELFAGDAL LPKYTPNVGG ADVRVDGPLA AYAESLVRII ERDFDAAHPG HRDRIDDPSR RAATILDHHR HRTRRVLDVL ADEGPATAWE VSAALFGDLS EIHVLHGPGE AFAHLDHLAD AGIIEPDGTA YRLIDPEPDV DALFPTTPLD DAVDGSEA
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