| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0453 |
|---|
| Symbol | |
|---|
| ID | 7401071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 470355 |
|---|
| End bp | 471878 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 643707517 |
|---|
| Product | Xanthine/uracil/vitamin C permease |
|---|
| Protein accession | YP_002565125 |
|---|
| Protein GI | 222478888 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG2233] Xanthine/uracil permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.740673 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.297493 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAG CCACAAGGAT GGCAGGGGAC GAGGACGAAA ATACGTTTGT TCAGTATGGT
ATCAATGACA AACCACCGCT CGGAAAGTCA CTCTTTCTCG GTGTCCAGCA CTATCTCACG
ATGGTGGGCG CGAACATCGC CGTGCCGCTT CTCCTCGCGG GTGCGATGGG AATGCCCGAC
GCGGTCGTTC CGCGTTTCGT CGGCACGTTC TTCGTCGTCT CGGGAATCGC GACACTCGCG
CAGACGACGT TCGGCAACCG CTACCCGATC GTGCAGGGAG CGCCGTTCTC GATGCTCGCG
CCCGCGCTCG CGGTCATCGG CGTCGTGACG GCGAACCCGC CGGAGGGTAT CGTCGCCTGG
CGGGCGGCGC TGCTCCAACT CCAAGGCGCG ATCATCGTCG CCGCGCTCGC CGAGGTCGCG
ATCGGCTATC TCGGACTCGT CGGACGGTTG CGGAGATATC TCTCACCGGT CGTTATCGCG
CCGGTCATCG TACTCATCGG CTTGTCACTG TTCAACTCGC CCGATATCGC GACAGCCAAT
CAGAACTGGT GGCTCGTCGG TCTGACGCTG GTCGCTATCG TTTTGTTCTC ACAGTACCTC
GGAGAGAGGT CAAACATCTT CCAGCTGTTT CCGGTCCTCC TCGGTATCGT CGTCGCATGG
GCAATCGCTG CGGGCTTATC GGTCCTCGGG ATCTTCGGGC CAGACACGCC CGGCTACATC
GATCTGGCAA GCGTCGCGGC GGCCGAACCG GTCCATCCCA TCTATCCGCT CCAGTGGGGT
ATGCCGAGCG TTACGCCCGC GTTCGTCATC GGTATGCTCG CCGGTGTCGC CGCTTCGATC
GTCGAATCTA TCGGTGATTA CCATGCCGTC GCCCGTCTCT CCGGAATGGG TGCCCCCAGC
AGCGAGCGCA TGTCTCACGG CATCGGTATG GAAGGACTCA TGAACGTCTT CTCCGGGGTG
ATGGGTACTG GCGGGTCGAC CTCGTACTCC GAAAATATCG GTGCTATCGG TCTCACCGGT
GTGGCCTCAC GGTACGTCGT CCAAATCGGT GCCGCGCTCA TGATTCTCGT CGGGTTCGTC
GGCTATTTCG GCCAGCTCGT CGCCACGATT CCGAGCCCGA TCATCGGTGG TCTCTACATC
GCAATGTTCG CCCAAATCGT CGGCGTCGGT CTCTCAAACC TCAAGTACGT CGACCTCGAC
TCGTCGCGAA ATATCTTCAT CATCGGAATC TCGCTCTTCT CCGGGCTGGC CATCCCGGAG
TACATGCGGA GCGTCGGGAG CGCGAGCGCC TTTCAACAGG GACTGGCCGA CAGCTTCCTC
GTCGGCCCGC TTCTGGGTGC CGACGTCGCC GCAAACACCA TCTACGTCAT CGGGTCGACG
GGTATGGCCG TCGGAGGGAT CGTCGCGATT TTCCTCGATA ACTCGATCGC CGGGACGGCT
ACGGAACGTG GACTCACCGC GTGGGAGGAA GCGGCCGAAG AGGATGCGGA TTTCACGTCC
GCTTACGAGC GTTTTTTCGG ATAA
|
|---|
| Protein sequence | MTEATRMAGD EDENTFVQYG INDKPPLGKS LFLGVQHYLT MVGANIAVPL LLAGAMGMPD
AVVPRFVGTF FVVSGIATLA QTTFGNRYPI VQGAPFSMLA PALAVIGVVT ANPPEGIVAW
RAALLQLQGA IIVAALAEVA IGYLGLVGRL RRYLSPVVIA PVIVLIGLSL FNSPDIATAN
QNWWLVGLTL VAIVLFSQYL GERSNIFQLF PVLLGIVVAW AIAAGLSVLG IFGPDTPGYI
DLASVAAAEP VHPIYPLQWG MPSVTPAFVI GMLAGVAASI VESIGDYHAV ARLSGMGAPS
SERMSHGIGM EGLMNVFSGV MGTGGSTSYS ENIGAIGLTG VASRYVVQIG AALMILVGFV
GYFGQLVATI PSPIIGGLYI AMFAQIVGVG LSNLKYVDLD SSRNIFIIGI SLFSGLAIPE
YMRSVGSASA FQQGLADSFL VGPLLGADVA ANTIYVIGST GMAVGGIVAI FLDNSIAGTA
TERGLTAWEE AAEEDADFTS AYERFFG
|
|---|
| |