Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0451 |
Symbol | |
ID | 7401069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 468244 |
End bp | 468954 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643707515 |
Product | 5-amino-6-(5-phosphoribosylamino)uracil reductase |
Protein accession | YP_002565123 |
Protein GI | 222478886 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain [TIGR01508] 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase, archaeal |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00233078 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.376483 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGTCG TCGTCAACGC GGCCCAGAGC GTCGACGGGA AACTCGCAAC GCGGCGCCGG GAGCAGCTCC GGATCTCGGG ACCGGAGGAT TTCGACCGAG TCGACCGCGT CAGGGCGGCC GCGGACGCGG TGTTAGTCGG GGTTGGAACC GTCCTCGCGG ACGACCCGCA CCTCACGCTC GACGAGGAGG ACCGACGCGT CGAACGGCTC CGGAACGGCC GCCCGGGCAA CCCCGCCCGC GTCGTCGTCG ACTCGACCGG ACGGACGCCG ACCGACGCCC GGATCCTCGA CGACGCGGCG ACGACCTACC TGCTCGTCTC CGCGTCGGCG CCCCCCGAGC GACGCGAGGC GCTTGCGGCC GCCGGTGCCG AGGTCGTCGT GGTCGAGGGC GGAAGCGGGA CCGAACGTGA GAGCGAGAGC GACGGGGACC ACGTCGACCT CGTGGCGGGA ATCCACGCGC TGGCAGAGCG GGGCATCGAC CGGCTGATGG TCGAGGGCGG CGGTGAAGTC ATCTACTCGT GTTTCGCGGC AGGACTCGTC GACGAGCTTC ACGTGTATGT GGGGTCGATG GTGATCGGGG GGCGTGACGC GCCGACGCTC GCCGACGGTG AGGGGTTCAC CGAAGCGTTC CCGCGGCTCG ATCTGGTCGA TACCGAGCGG CTCGACGACG GAATCGTGCT CTCGTACGAG GTCGGAGACG GCACGCCGTA G
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Protein sequence | MHVVVNAAQS VDGKLATRRR EQLRISGPED FDRVDRVRAA ADAVLVGVGT VLADDPHLTL DEEDRRVERL RNGRPGNPAR VVVDSTGRTP TDARILDDAA TTYLLVSASA PPERREALAA AGAEVVVVEG GSGTERESES DGDHVDLVAG IHALAERGID RLMVEGGGEV IYSCFAAGLV DELHVYVGSM VIGGRDAPTL ADGEGFTEAF PRLDLVDTER LDDGIVLSYE VGDGTP
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