| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0447 |
|---|
| Symbol | metG |
|---|
| ID | 7401065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 463085 |
|---|
| End bp | 465229 |
|---|
| Gene Length | 2145 bp |
|---|
| Protein Length | 714 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643707511 |
|---|
| Product | methionyl-tRNA synthetase |
|---|
| Protein accession | YP_002565119 |
|---|
| Protein GI | 222478882 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0143] Methionyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00398] methionyl-tRNA synthetase
[TIGR00399] methionyl-tRNA synthetase C-terminal region/beta chain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.381782 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCACG ACGACTTCCC CACCGACGAT CCGGCGGTGG TGACCTGTGG ACTGCCGTAC
GCCAACGGCG ACCTCCACAT CGGCCACCTC CGCACCTACG TCGGCGGCGA CGTGTACCGG
CGCGCGCTCG AACGACTCGG GCAGGAGACC GCGTTCGTCT CCGGCTCCGA CATGCACGGC
ACCCCCGTCG CGGTCAACGC CGAGCAGGAG GGGGTCTCCC CCGAGCAGTT CGCGCTCGAC
TGGCACGAGC AGTACGCCGC GACGTTCCCG AAGTTCAACG TCGAGTTCGA CAACTACGGC
CACACCCACG ACGAGACGAA CACGGCGGTG ACCCAACAGC TCGTCCGTGA CCTCGACGAG
GGCGGCCACC TCTACGAGAA GGAGATCATG GTCGCGTACG ACCCCGTCGA CGACCAGTTC
CTCCCGGACC GGTACGTCGA GGGGACCTGC CCCTACTGCG GTGCACACGC CCGCGGCGAC
GAGTGCGACG AGGGGTGCCA GCGCCACCTC GAACCCGGCG AGGTCGAGGA CCCCGAATCG
ACGATCACCG GCAACCCCGC CGAGTACCGC GAGCGCACCC ACCAGTTCTT CGAAGTCTCC
GCGTTCTCCG AGTACCTCTC CGGCTTCCTC GATCGGCTGG AGGGGACCTC GAACGCCCGG
AACCAGCCCC GCGAGTGGAT CGAGCAGGGG CTCCAAGACT GGTGTATCAC CCGCGACATG
GACTGGGGGA TCGACTACCC CGGCGAAAAC CCGCAGGACC TCGTCTTATA CGTCTGGGTC
GACGCCCCGA TCGAGTATAT CTCCTCGACG AAGCAGTACA CCGAGCGCGT CGGCGCCGAC
GCCTTCGACT GGGAGGCCGC GTGGAAGGAG GGCGCGAGCG ACGCGCACCC CGAGGGCGGC
GAGATCGTCC ACGTGATCGG CCGCGACATC ATTCAACATC ACACGATCTT CTGGCCCGCG
ATGCTGGAGG CGACCGACCA CACCGAGCCG CGCGCCGTGA TGGCGAGCGG CTTCGTCACC
CTCGGCGGCA AGGGCTTCTC CACGAGCCGC GACCGCGCGG TCTGGGCCGA CGAGTACCTC
GACGAGGGGT TCCATCCCGA CCCGCTGCGC TACTACCTCG CGACCAACGG CGGGTTCCAG
CAGGACGTGG ACTTCTCGTG GGAGAAGTTC CGCGACCGCG TCAACACCGA GCTGGTGGGG
ACCGTCGGCA ACTTCCTCTA CCGCTCGCTG CTCTTCGCCC ACCGCAACTA CGACGACGCG
CCCATCGCGG ACGCGACGAG CGACGAGGTC GCCGAGCGGA TCGAGGAGGC GATCGCCGAC
TTCGAGGCCG CCGTCAACGA CTACTCCGTG CGCGCGGTCG GCGACGCCGT CACCGACCTC
GCCCGGTTCG GCAACGAGTA CATCCAGCGC AGCGAGCCGT GGAAGCTCGT GGACGACGAC
CCCGAGGAGG CCGCGCAGGT CATCCACGAC TGCGTCGCGA TCGCGAAGGC GATCGCGGTC
CTGTTCGAGC CCATCGCACC CGAGAAGACC GAGCGTCTCT GGGACCAGCT CGGCGAGGAC
GGCTCGGTCC ACGAGACCAC CGTCGAGGCG GCCCGCGAGG GCCCCGCCGG CGACCTCGCG
GAGCCGACGG AGCTGTTCGA GCAGATCGAA GACGAGCGCG TCGAGGCGCT CAACGAGAAG
CTGGAGGCGC GCGCCGCCGA GGCGGAGGAC GGCGACGAAG CGGACGAGGA GAGCGGCGAC
GACGGCGAGG CGGACGACGG CAGCGACGAA GCGGACGACG ACACCACTGA CGAACCCGAC
ATGACCGACA TCGAACCCCT CAGCGACGAC CGCATCAGCT TCGACGACTT CCAGGAACTG
GACATCCGGA TCGGCCGGAT CGAGGAGGCG GAGGGTATCG AGGGCGCCGA CGACCTCCTG
AAGCTCCGCG TCGACCTCGG CGCGGAGACC CGGACGATCG TCGCGGGGCT CAAACAACTC
CACGACGTGG ACGACCTGCC CGGAACGAAG GTCGTCGTGC TCGCGAACAT GGAGAAGGCG
GAGCTGTTCG GCGTCGAGTC GAACGGGATG GTGCTCGCCG CCGGCGAGGA GGCCGACCTC
CTCACCACCT ACGAGGACGC CGGGCCGGGG ACGAAGGTGA AGTAA
|
|---|
| Protein sequence | MSHDDFPTDD PAVVTCGLPY ANGDLHIGHL RTYVGGDVYR RALERLGQET AFVSGSDMHG
TPVAVNAEQE GVSPEQFALD WHEQYAATFP KFNVEFDNYG HTHDETNTAV TQQLVRDLDE
GGHLYEKEIM VAYDPVDDQF LPDRYVEGTC PYCGAHARGD ECDEGCQRHL EPGEVEDPES
TITGNPAEYR ERTHQFFEVS AFSEYLSGFL DRLEGTSNAR NQPREWIEQG LQDWCITRDM
DWGIDYPGEN PQDLVLYVWV DAPIEYISST KQYTERVGAD AFDWEAAWKE GASDAHPEGG
EIVHVIGRDI IQHHTIFWPA MLEATDHTEP RAVMASGFVT LGGKGFSTSR DRAVWADEYL
DEGFHPDPLR YYLATNGGFQ QDVDFSWEKF RDRVNTELVG TVGNFLYRSL LFAHRNYDDA
PIADATSDEV AERIEEAIAD FEAAVNDYSV RAVGDAVTDL ARFGNEYIQR SEPWKLVDDD
PEEAAQVIHD CVAIAKAIAV LFEPIAPEKT ERLWDQLGED GSVHETTVEA AREGPAGDLA
EPTELFEQIE DERVEALNEK LEARAAEAED GDEADEESGD DGEADDGSDE ADDDTTDEPD
MTDIEPLSDD RISFDDFQEL DIRIGRIEEA EGIEGADDLL KLRVDLGAET RTIVAGLKQL
HDVDDLPGTK VVVLANMEKA ELFGVESNGM VLAAGEEADL LTTYEDAGPG TKVK
|
|---|
| |