Gene Hlac_0437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0437 
Symbol 
ID7401055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp454192 
End bp454572 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content58% 
IMG OID643707501 
Producttransposase IS200-family protein 
Protein accessionYP_002565109 
Protein GI222478872 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.769962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.228664 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAAGA GTACCCGTCA CGCGAAATAC GAACTCTACT ACCACATAGT GTTCGTGCCG 
AAATATCGGC GTTCGCACCT GACGGGGAAG ACGAAGGAAC GTCTCGAATC CATCTTCGCG
GAAATCTGTG AGGACAAGGG CCTCGAACTG GCCGAGTCCG AGGTCATGCC CGACCACGTA
CACCTGTTCA TCGGGAGTCC ACCGAAGAAC GCCCCGTCGC TCATCGTCAA CTGGGTGAAG
GGCATCTCCG CCCGCAAGTA CAACCAGCGG TACGACGACC GCGTGAAGTG GACTCGTTCG
TACTACGTCG GAACAGCGGG AAGCGCCTCG AAGGGCGCTG TCGAACAGTA CATCGCTGAA
CAGGAGGGTG ACGACGAATG A
 
Protein sequence
MVKSTRHAKY ELYYHIVFVP KYRRSHLTGK TKERLESIFA EICEDKGLEL AESEVMPDHV 
HLFIGSPPKN APSLIVNWVK GISARKYNQR YDDRVKWTRS YYVGTAGSAS KGAVEQYIAE
QEGDDE