| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0431 |
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| Symbol | gatB |
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| ID | 7401049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | + |
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| Start bp | 449601 |
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| End bp | 451088 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643707496 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_002565104 |
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| Protein GI | 222478867 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.024614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.134197 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTACTC AGGCCGCGAC GGAGGAGCGG ACGGTCGTGA TCGGGCTGGA GGTTCACGTC
CAGCTCGAGA CCGACACGAA GATCTTCTGC GGCTGCTCGA CGGAGCCCGA AGAGGACGAG
GAGCCGAACA CGCGCACGTG CCCGACTTGC CTCGGGCTGC CGGGCGCGCT GCCGGTCCTC
AACGAGGGCG CCGTCGAGGC CGCCGTGAAG ATCGGCAAGG CGATCGACGC CGACATCCCC
GAGACGACGA CGTTCCACCG GAAGAACTAC TACTACCCCG ATCTCCCGAA GAACTTCCAG
CTCACCCAGT ACGACGCCCC GATCTGCCAG TCCGGCGAGC TTGAGGTCCG CGTCGACAGC
GAGCCCCGAA CCATCGGAAT CACCCGCGCG CATCTCGAAG AGGACCCCGG GAGCCTCCAG
CACGCCGGCG GCTCGATCGA GACCGCCACC CACACCCTGG TGAACTACAA CCGCGCCGGG
ACGCCCCTGA TGGAGATCGT CACCGAACCG GATTTCCGGT CACCGGCCGA GACTCGCGCC
TTTTTGGCGA AGCTGGAAGA GGTGTTGGAG TACCTCGGCG TCTTCGACCC GACCCGCGAC
GGGAGCCTGC GCGTCGACGC CAACGTCTCC TTGGTCCCCG AGAGCGAGGT CGCCGCCGAC
GGGACGATCA GCGACGACGC CCTCGCCGAC GTGAACCGCG CCGAGGTGAA GAACATCTCC
AGTCACAAGG GCGCAGAGCA GGCGCTCGCG TACGAGGTCA CCCGGCAGGA GAACGTCCTC
CGGCGCGGCC GCGAGATCGA ACAGGAGACG CGCCACTGGG ACGAGGCGCG CGGCGTCACC
GTCTCCATGC GCTCGAAGGA GGCCGAGAAG GATTACCGGT ACTTCCGGGA GGCCGACCTC
CCCGCGCTGG AGGTGTCGGA CTGGAAATCG CAGATTCCGA TCCCGGAGCT GCCCGACGCC
CGCCGCGAGC GCTTCCGCGA GGAGTACGGG CTCGACCGCG AATCGGCCTC GAAGCTCACC
TCGACGAAGG CGGTGGCCGA CTTCTTCGAG GACGTGGCCG AGCAGTTCGA CCCCGAACTC
GCCGCGACGT GGGTCGCCGA CAACCTCCTC GGCGAGCTCA ACTACCGGGA GATGTCGATT
ACGGACGTGG AGGACCGCCT CGACGAGTTC AAACGCCTGA TCGAGTTAGT CGCGGCCGAC
GAGCTCACGG TGAAAAACGC CGAGGAGATC GTCCTCCGTG AGATGCTCGA CGCGGGCGAG
GACCCCGAGA CCGTCATCGA GCGCGAGGGG CTCGGCGTCG CCGACTCCGG CGAGGTCGCG
GCCGCGGTCA CGGCCGCCAT CGACGACAAC CCCGACGCCG TGAGCGACTA CCACGACGGC
GACGAGGGCG CGATCAACTT CCTCGTCGGA CAGGTGATGC AGGCGACGGG CGGGAGCGCC
GACCCGGGCG AGGTGAACGG GCTGCTCCGC GAGGAGCTGG ACGGGTAG
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| Protein sequence | MSTQAATEER TVVIGLEVHV QLETDTKIFC GCSTEPEEDE EPNTRTCPTC LGLPGALPVL
NEGAVEAAVK IGKAIDADIP ETTTFHRKNY YYPDLPKNFQ LTQYDAPICQ SGELEVRVDS
EPRTIGITRA HLEEDPGSLQ HAGGSIETAT HTLVNYNRAG TPLMEIVTEP DFRSPAETRA
FLAKLEEVLE YLGVFDPTRD GSLRVDANVS LVPESEVAAD GTISDDALAD VNRAEVKNIS
SHKGAEQALA YEVTRQENVL RRGREIEQET RHWDEARGVT VSMRSKEAEK DYRYFREADL
PALEVSDWKS QIPIPELPDA RRERFREEYG LDRESASKLT STKAVADFFE DVAEQFDPEL
AATWVADNLL GELNYREMSI TDVEDRLDEF KRLIELVAAD ELTVKNAEEI VLREMLDAGE
DPETVIEREG LGVADSGEVA AAVTAAIDDN PDAVSDYHDG DEGAINFLVG QVMQATGGSA
DPGEVNGLLR EELDG
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