Gene Hlac_0427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0427 
Symbol 
ID7401045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp445743 
End bp446123 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content58% 
IMG OID643707492 
Producttransposase IS200-family protein 
Protein accessionYP_002565100 
Protein GI222478863 
COG category[L] Replication, recombination and repair 
COG ID[COG1943] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.465704 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.172716 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAAGA GTACCCGTCA CGCGAAATAC GAACTCTACT ACCACATAGT GTTCGTGCCG 
AAATATCGGC GTTCGCACCT GACGGGGAAG ACGAAGGAAC GTCTCGAATC CATCTTCGCG
GAAATCTGTG AGGACAAGGG CCTCGAACTG GCCGAGTCCG AGGTCATGCC CGACCACGTA
CACCTGTTCA TCGGGAGTCC ACCGAAGAAC GCCCCGTCGC TCATCGTCAA CTGGGTGAAG
GGCATCTCCG CCCGCAAGTA CAACCAGCGG TACGACGACC GCGTGAAGTG GACTCGTTCG
TACTACGTCG GAACAGCGGG AAGCGCCTCG AAGGGCGCTG TCGAACAGTA CATCGCTGAA
CAGGAGGGTG ACGACGAATG A
 
Protein sequence
MVKSTRHAKY ELYYHIVFVP KYRRSHLTGK TKERLESIFA EICEDKGLEL AESEVMPDHV 
HLFIGSPPKN APSLIVNWVK GISARKYNQR YDDRVKWTRS YYVGTAGSAS KGAVEQYIAE
QEGDDE