| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0422 |
|---|
| Symbol | |
|---|
| ID | 7401040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 440746 |
|---|
| End bp | 441636 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643707487 |
|---|
| Product | methylthioadenosine phosphorylase |
|---|
| Protein accession | YP_002565095 |
|---|
| Protein GI | 222478858 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0005] Purine nucleoside phosphorylase |
|---|
| TIGRFAM ID | [TIGR01694] 5'-deoxy-5'-methylthioadenosine phosphorylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.200646 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCA TCGGCTTTAT CGGCGGCAGC GGCATCTACG AGGCGCTGCC CCTGAACGAC
GTGCGCGAGG TCGAGTACGA CACGCCCTAC GGCGAGCCCA GCGACGCGAT CACGATCGGC
GAGTTCGGGG ACACGGGGAA GGAAGTGGCC TTCCTCCCGC GGCACGGCTC GAACCACGGC
GTCTCGCCCA CCGACCTCCC CTACCGCGCG AACATGTACG CTCTTAAAAA GGCGGGCGTC
ACGCACATCT TCGCGTCGAA CGCGGTGGGG AGCCTGAAAG CGGAACTGGA GCCCGGCACG
CTCGTCGTTC CCGATCAGAT CTACGACCGG ACGAAGCACC GCGACCTCTC CTTTTACGGC
GACGGCGTCG TCGTCCACCA GCCGTTCGCG GACCCGTACA GCCCCGAGCT GGTCGATCAC
CTCACCGAGG CCGCGGAGTC GGCCGTCGGC GGCGACGGGG AGGGTGACAC CGCCGACGAC
ACGAACGTCG TGAAGGGCGG CACCTACGTC TGCATCGAGG GCCCGCAGTA CTCGACGCGT
GCGGAGTCGG AGTTTTACAA GAGTCAAGGG TGGGACCTGG TCGGCATGAC CGCGATCCCG
GAGGCGAAGC TCGCCCGCGA GGCGGAGATC GCGTACGCGA CGATCGCCGG CGTCACCGAC
TACGACGTGT GGAAGGCGGA CAGCGAGGTG ACGCTCGCGG AGGTACTGGA GAACGCCGAA
CAGAATCAGA AGGCGATCAA AGCCGCCGTC GAGGAGGCCG TGCGGACGCT CCCGGACGGC
TTGGAGTGCG ACGCCCACAC ATCGCTCGAA GGCACCGTCA ACACGCCTAC TGAAGCGATC
CCGGAGGACA CCCGCGAGCG CGTCGAGCCG CTGCTGGGCG ACTACTTATA A
|
|---|
| Protein sequence | MSTIGFIGGS GIYEALPLND VREVEYDTPY GEPSDAITIG EFGDTGKEVA FLPRHGSNHG
VSPTDLPYRA NMYALKKAGV THIFASNAVG SLKAELEPGT LVVPDQIYDR TKHRDLSFYG
DGVVVHQPFA DPYSPELVDH LTEAAESAVG GDGEGDTADD TNVVKGGTYV CIEGPQYSTR
AESEFYKSQG WDLVGMTAIP EAKLAREAEI AYATIAGVTD YDVWKADSEV TLAEVLENAE
QNQKAIKAAV EEAVRTLPDG LECDAHTSLE GTVNTPTEAI PEDTRERVEP LLGDYL
|
|---|
| |