Gene Hlac_0413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0413 
Symbol 
ID7401030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp433018 
End bp433608 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content69% 
IMG OID643707477 
Product50S ribosomal protein L15e 
Protein accessionYP_002565086 
Protein GI222478849 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1632] Ribosomal protein L15E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.547209 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGAA GTTTCTACTC GCACATCAAG GAGGCGTGGC GGTCCCCCAA GGAGGGGAAA 
CTCGCAGAGC TACAGTGGCA GCGCAAACAG GAGTGGCGCG ACGAGGGCGC CATCGAGCGC
ATCGAGCGCC CCACCCGCCT GGACAAGGCC CGCGAGCTGG GCTACAAGGC GAAGCAGGGC
GTCGTCGTCG CCCGCGTGAG CGTCCGCAAG GGCGGCTCGC GCAAGCAGCG ACACAAGGCC
GGCCGCCGCT CGAAGCGGCA GGGTGTCAAC CGGCTCTCGC GCCGCAAGTC GATCCAGCGC
ATCTCGGAGG AGCGCGCCTC GCGCAAGTAC CGGAACCTCC GCGTGCTCAA CTCCTACTGG
GTCGGTGAGG ACGGCTCCCA GAAGTGGCAC GAAGTGATCC TGGTGGACCC GAACCACCCC
GCGATCGAGA ACGACGGCGA TCTCGGCTGG ATCGCCTCGG ACGACCACAA GGGGCGCGCG
TTCCGCGGGC TCACCTCCGC CGGCACCAAG GGTCGCGGCC AGCGCACGCG CGGCACGGGT
ACGGAGAAGA CCCGCCCGAG CGTCACCGGC AACGACCGGC AGGGCAAGTA A
 
Protein sequence
MARSFYSHIK EAWRSPKEGK LAELQWQRKQ EWRDEGAIER IERPTRLDKA RELGYKAKQG 
VVVARVSVRK GGSRKQRHKA GRRSKRQGVN RLSRRKSIQR ISEERASRKY RNLRVLNSYW
VGEDGSQKWH EVILVDPNHP AIENDGDLGW IASDDHKGRA FRGLTSAGTK GRGQRTRGTG
TEKTRPSVTG NDRQGK