| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0412 |
|---|
| Symbol | |
|---|
| ID | 7401029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | + |
|---|
| Start bp | 429354 |
|---|
| End bp | 432545 |
|---|
| Gene Length | 3192 bp |
|---|
| Protein Length | 1063 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 643707476 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002565085 |
|---|
| Protein GI | 222478848 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAACG ACAATAATAC ACGTAAGAAG GCCAGTGCGG TCTTCTTCGC GGCGATCATG
GTCGTCTCCA TGGTCGCAAT TGGTTTCGCT GCTGCTCCGG CAGCAGCCGA CCTTGATGGT
ACAAACAGTA CCATCGACTC TGCGGCCGCC GAACCCGTGA CGGCTGGGTT CGACTCGTCA
GAGCAGGACG TACAGGTAAA GGTTACAATT AGCGACAATG CCAGCGACAA CGTGACTGTC
GACCTCTCTG AGGCGGCAGA CGTGGAAGCT GTTCCGTCGC TACAGGACGT AACCATCTCC
CCCAGTACGA CTGGTAATGT TAACCTCCTC GGCTCGGAGT TTGACGAGAG CACGAACGTT
CTCGAGTTCC AAGTCAAAGG TACCACCGCA GGAGACGACG TCGCAACAGT CACTGCCTCC
TTCGAGCACG ACCTCAGCAA TGTTGAAGGT CCCGCCGGTA CTACAAACCG GCTGAGCTAC
AGCGTTGGTG CAGGCACTGA AACGGATTCC ACGATTGCTA ACTTCGAGGT TTACTCCGCT
GAGGATGTCA GCCTTGACGC ACCGCTCACC GAAGACAATG TGAACTCCGC GGATTTCACA
GTCTCGCACC CGGCTAACAC TCCGGTCGCC GGTGATGAAG TTTCACTCTT CATCACTGGA
AACGATAATT CGACTGTTGT CGATCCCACT TCGGCTACCA CAGACGCAGA CCCCACAACC
TTCACGGGTG TCAATCTGGA CAGTCAGGGA ATCGCTTCCG GTGCTGGCGA CGAGATCCAG
TTCCATGCTG TGTTGGCGGC TGACGCCGAC AACGGTACGA GCGGATTCGA GGCCAGCTTA
AATAACGTTC AGGCTGATGG TACCGCCACT GTCGATGATT CTGATGCGGA TATCATCACC
GATAGTGATT GGGACGGTTC GCAGCTCTGG GAAGGTCAGA CAGTTACTGT TGACCTTAGT
GGCAGCAATG TTGCTCCCGG TGACGAGGTC ACCGTGCGAG AGGTCACTAA CCGCAATGGT
AACGGGTACG CGACCAACAC GCGACTAGCC CGCTCCCTCA CCGTTAGCGG TGATCGGACG
ATCTCCATCG AAACGGATCG TCTCCGTGGT GAAGCCGAAT ACGTCCTTCG GACGTCTAAC
GGGCTCCTAG CAGCCGGAAC GGCCGGCGCT GGTACTGACG GAGAGTTCAG GATGGTTCTT
GGTGTATCCG ACATCGCTGA GGCGCAAGTT CTCACGCAGG ACCTCTCGGC AGAGTTTGCT
GAGGATGAAG CGAACAACGA CGAGAAGATC GACGTCGACG TTGCATCGCT GCGTAGCGAA
TTCGACGTTG AAGTGAGCGG CGACCTTGAC GACAGCGAGC TCTCCGAAGA AGAACTCGAG
AACATCTTCG ACGACGAGAG CGCAACCGGC CTCGACGACG GCGACGATGA CACGGTGCTC
ATCGAGGACG TCCAGGACGG CGAAGCCTTC GTTGCGAACT TCACTGATGT TGACGGCGGC
AACTACTCCT TCGACTTCGA CGTCGAGGAC ACTACGGCCT CCGACACCGA CTCGATCGAA
GTGACCGAGC TCGGCGAGGG TGAACTCACC CTTGGTGGCG AGAGCATCGT CACCGAACAG
CAGGGTGACG TCGCGAACAT CACCGTCACC TTTGACGGTA CCGCTGAAAC TGGTACGCTC
CTCGTCGGCG ACGAAGACGA TGTTGGCTAC CAGGGTAACA TCACGATTGA CTCGAACGGC
GAAGACGAAG TGAACGTCCT GTTCAACAGC TACGCCGCGG GTAGCTCCGG TAACGGGACG
GTCTTTGAGC TCGCGAACCC GGACGACACG GACGCTGAGC TCGACAACTT CCAGCAGAAC
CAGATTTCCG ACGTCCTCTC CGATGGCGAC TACACGCTCT CGGTGAGTAC GTCGAGCGAC
TACGACGATA CGCTGGACGA TCCCGACACG ATCGGGACGC TCGTGCTCGA ACAGCGCGCG
ACGACGAACC AGCAGATCTG GACGACCTCT GAAGGCACCG TCACTGACAT CGTCGACGCA
GCAGATGCCG ACGATGAGGA CGGGCTCGAA GAGCTGAACT CCCAGATTGA GGGTGACAAC
GTGACCCAGG CGAGCACGAT CGCCGAGGGC GACTACGTCA TCCACCAGAT CGAGGCGTCC
GGCCTGTCCG GCCTCCTCGC GCAGTACGAC GACGACCCGA CCACCGCGCT TAACGATGCA
GTGACCGACA CCGGCGCGGG TATCGGCACT GCAGTGACCG ACACCGGCGC GGGTATCGGC
ACCAACGACG GTGCGCTCAG CCTGCGTGTC CGTCAGACTC AGGCCTCGAC GACCGCCAAC
CAGGATCCCG CTGAACTGCA GAGCAACATC CTGGGTAACA TGACGGTCTT CGCAGACGAG
GAGACGAACA ACTACTACGT CGTCTACGAC CTCGACGACA CGTCGGCTGA GGATGGCGAA
GCGTTCGACG CACGCTTCCG CGTGCAGGAC GATCGCCTCC TCAACCCGTC TGACTCGGAC
CGTGACGCTC TCTCGACGAA CGAGCTCACC AACGAGTACT ACCAGAGCGT GACCGCTTCC
TTCGACGTGG CAGAGCGTGA ATTCGAGTTC GACCAGGACC CTTACAACGT GACGAACGCT
GAGGGTCAGG CCGTCTCGGG CACCTCGAAC GTTGCGCCCG GTACTGAAGT GAACGTCCGC
CTCCGCTCGG CGTCTGGTAC GAGTCCCTCG TTCATCGAGA CGAGCGAGGG CGTGCGTGTC
AACGCTGACG GCACGTGGAT GACTGAATTC GACTTCAGTG ACACCTCGGT CGGTGACGAG
TACACGTTCA CGGTCCGGCA GACGGGCCTT GACGAGAACC CGTCCGTCGA CGGTACGGTC
ATCGAAGCAG TCGATGACGG TACCGACGAT GGTGACGACG GCAACGTGAC CGACGGTGAC
GACGGTGACG ACGGTAACGT TACCGACGGT GACGATGGTG ACGACGGCAA CGTCACTGAC
GGTGACGACG GCACCGACGA TGGTGACGAC GGAACCGACG ACGGTGACGA CGGCTCCGAC
GATGGATCCG ACGGCTCCGA CGGCGGTGAC GACGGCGGCG ACTCCGAAGA CGGCACGCCC
GGCTTCGGTG CGCTCGTCGC TCTCGTCGCC CTCATCGCGG CTGCGCTCCT CGCGACGCGG
CGTAACGAGT AA
|
|---|
| Protein sequence | MTNDNNTRKK ASAVFFAAIM VVSMVAIGFA AAPAAADLDG TNSTIDSAAA EPVTAGFDSS
EQDVQVKVTI SDNASDNVTV DLSEAADVEA VPSLQDVTIS PSTTGNVNLL GSEFDESTNV
LEFQVKGTTA GDDVATVTAS FEHDLSNVEG PAGTTNRLSY SVGAGTETDS TIANFEVYSA
EDVSLDAPLT EDNVNSADFT VSHPANTPVA GDEVSLFITG NDNSTVVDPT SATTDADPTT
FTGVNLDSQG IASGAGDEIQ FHAVLAADAD NGTSGFEASL NNVQADGTAT VDDSDADIIT
DSDWDGSQLW EGQTVTVDLS GSNVAPGDEV TVREVTNRNG NGYATNTRLA RSLTVSGDRT
ISIETDRLRG EAEYVLRTSN GLLAAGTAGA GTDGEFRMVL GVSDIAEAQV LTQDLSAEFA
EDEANNDEKI DVDVASLRSE FDVEVSGDLD DSELSEEELE NIFDDESATG LDDGDDDTVL
IEDVQDGEAF VANFTDVDGG NYSFDFDVED TTASDTDSIE VTELGEGELT LGGESIVTEQ
QGDVANITVT FDGTAETGTL LVGDEDDVGY QGNITIDSNG EDEVNVLFNS YAAGSSGNGT
VFELANPDDT DAELDNFQQN QISDVLSDGD YTLSVSTSSD YDDTLDDPDT IGTLVLEQRA
TTNQQIWTTS EGTVTDIVDA ADADDEDGLE ELNSQIEGDN VTQASTIAEG DYVIHQIEAS
GLSGLLAQYD DDPTTALNDA VTDTGAGIGT AVTDTGAGIG TNDGALSLRV RQTQASTTAN
QDPAELQSNI LGNMTVFADE ETNNYYVVYD LDDTSAEDGE AFDARFRVQD DRLLNPSDSD
RDALSTNELT NEYYQSVTAS FDVAEREFEF DQDPYNVTNA EGQAVSGTSN VAPGTEVNVR
LRSASGTSPS FIETSEGVRV NADGTWMTEF DFSDTSVGDE YTFTVRQTGL DENPSVDGTV
IEAVDDGTDD GDDGNVTDGD DGDDGNVTDG DDGDDGNVTD GDDGTDDGDD GTDDGDDGSD
DGSDGSDGGD DGGDSEDGTP GFGALVALVA LIAAALLATR RNE
|
|---|
| |