Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0410 |
Symbol | |
ID | 7401027 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | - |
Start bp | 427671 |
End bp | 428396 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 643707474 |
Product | integral membrane protein-like protein |
Protein accession | YP_002565083 |
Protein GI | 222478846 |
COG category | [S] Function unknown |
COG ID | [COG1738] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00697] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.873189 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAGG GGACGGCTCG GGCCGCCGGC GGCGAGGGGC CGTTCGCGGC CGACCCGCTC GACCGCTCCG CGGTGGCCGC GGTCGGGCTG ATCACCCTGT TCGTCGTCGC GCTCGCCACC GCACAGCTCA CCGCCGCGAA GGTGATCGCC CTCCCGCTCC CGTTCGCGCT CCCAGTGGTC GGCCCCGAGA TCACGCTGCC GGGCGCCGCG CTCGCGTACG CGCTCACGTT CCTCGCGTCC GACTGCTACG CCGAGCTGTA CGGCCGCCGC GCCACGCAGG TGGTCGTCAA CGTCGCCTTC CTCGCGAACT TCCTCGTGCT CGCGCTCGTC TGGTCCACCC TCGCCGCGCC CGGGATCGAC CCCGAGATCG CGGCCGCCTT CGACACCGCG CTCGGCCCCG CGGCCAACGT CGTCGCCGGG AGCCTGCTCG CGTACGTCGT GAGCCAGAAC TGGGACGTGG TCGTCTTCCA CGCGATCCGC GACCGCACCG GCCGCGGCAT GCTGTGGCTG CGCAACATCG CGTCGACCGC CAGCAGTCAG GCCATCGACA CCGCGATCTT CGTCGGCGTC GCGTTCTACG CCGCCCCCCT CGTGCTCGGC TCCGGGGACC CGCTCCCGGC GAGCGTCCTC CTCGCGCTCG GCCTCGGCCA GTACCTCCTC AAACTCGCGA TCGCCGTCCT CGACACCCCG ATCGTCTACC TCGTCGTCGG CGCCGTCCGC GAGTAG
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Protein sequence | MSEGTARAAG GEGPFAADPL DRSAVAAVGL ITLFVVALAT AQLTAAKVIA LPLPFALPVV GPEITLPGAA LAYALTFLAS DCYAELYGRR ATQVVVNVAF LANFLVLALV WSTLAAPGID PEIAAAFDTA LGPAANVVAG SLLAYVVSQN WDVVVFHAIR DRTGRGMLWL RNIASTASSQ AIDTAIFVGV AFYAAPLVLG SGDPLPASVL LALGLGQYLL KLAIAVLDTP IVYLVVGAVR E
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