Gene Hlac_0410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0410 
Symbol 
ID7401027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp427671 
End bp428396 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content73% 
IMG OID643707474 
Productintegral membrane protein-like protein 
Protein accessionYP_002565083 
Protein GI222478846 
COG category[S] Function unknown 
COG ID[COG1738] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00697] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.873189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGG GGACGGCTCG GGCCGCCGGC GGCGAGGGGC CGTTCGCGGC CGACCCGCTC 
GACCGCTCCG CGGTGGCCGC GGTCGGGCTG ATCACCCTGT TCGTCGTCGC GCTCGCCACC
GCACAGCTCA CCGCCGCGAA GGTGATCGCC CTCCCGCTCC CGTTCGCGCT CCCAGTGGTC
GGCCCCGAGA TCACGCTGCC GGGCGCCGCG CTCGCGTACG CGCTCACGTT CCTCGCGTCC
GACTGCTACG CCGAGCTGTA CGGCCGCCGC GCCACGCAGG TGGTCGTCAA CGTCGCCTTC
CTCGCGAACT TCCTCGTGCT CGCGCTCGTC TGGTCCACCC TCGCCGCGCC CGGGATCGAC
CCCGAGATCG CGGCCGCCTT CGACACCGCG CTCGGCCCCG CGGCCAACGT CGTCGCCGGG
AGCCTGCTCG CGTACGTCGT GAGCCAGAAC TGGGACGTGG TCGTCTTCCA CGCGATCCGC
GACCGCACCG GCCGCGGCAT GCTGTGGCTG CGCAACATCG CGTCGACCGC CAGCAGTCAG
GCCATCGACA CCGCGATCTT CGTCGGCGTC GCGTTCTACG CCGCCCCCCT CGTGCTCGGC
TCCGGGGACC CGCTCCCGGC GAGCGTCCTC CTCGCGCTCG GCCTCGGCCA GTACCTCCTC
AAACTCGCGA TCGCCGTCCT CGACACCCCG ATCGTCTACC TCGTCGTCGG CGCCGTCCGC
GAGTAG
 
Protein sequence
MSEGTARAAG GEGPFAADPL DRSAVAAVGL ITLFVVALAT AQLTAAKVIA LPLPFALPVV 
GPEITLPGAA LAYALTFLAS DCYAELYGRR ATQVVVNVAF LANFLVLALV WSTLAAPGID
PEIAAAFDTA LGPAANVVAG SLLAYVVSQN WDVVVFHAIR DRTGRGMLWL RNIASTASSQ
AIDTAIFVGV AFYAAPLVLG SGDPLPASVL LALGLGQYLL KLAIAVLDTP IVYLVVGAVR
E