Gene Hlac_0409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0409 
Symbol 
ID7401026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp426358 
End bp427587 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content73% 
IMG OID643707473 
Producthypothetical protein 
Protein accessionYP_002565082 
Protein GI222478845 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACAC GCGTTTACGC GGCCTACGAC GATGGGCTCC GGATCGTCGA CCCCGAGACG 
GGGACGGTCT CACACCGGCT GGCGGACCGC GCGGTCGAGT GTCTCTCGGT CGTTTCGGGT
GGCACCGAGT CCGGTGGGAC GGGCGGCGAC GGCGAGTGTA TCGACGGCGA CGGGAGTGGG
GGAGACGGGA GTGGGGGAGA CGAGAGCAGG GGAGACGAGA GCAGGGGAGA CGGGTCCAAG
AGAGACCGGT CCGCCGGGGC CCGCGTGCTC GCCGGGACGT TCGACGCGGG GCTGTTCCGC
TCGACCGACG GCGGAGGGTC CTTCGAGCGC GTCGCCACCG AGAGCCTCGG TCCGGGCGGG
TCCGGATCCG AGGCGGTCAC CGCGGTCGCG ACGAGCCCGC ACGACCCCGA GGTCGTCTGG
ATCGGAACGG AACCCTCGCG GGTGTATCGG TCGACGGACG GCGGCGAGAC CGTCGAGCGA
ATCGGGGGGC TGACCGAGGT CCCCTCCGCG TCCGAGTGGT CGTTCCCGCC TCGACCCGAC
ACCCACCACG TCCGGTGGAT CGAGCCGTGT CCGGCCGACC CGGAGCGGTG GTTCGTGGGC
GTGGAGGCCG GGGCGCTGGT CGTGACGCCG GACGGCGGGG AAACGTGGGT CGACCGACCC
GAGGGCTCAC GTCGGGACAA CCACGCGCTC GCGACCCACC CGGACGCGCC GAATCTGGTG
TACGCGGCCG CGGGCGACGG ATTCGCGGAG AGCGGCGACC GCGGCGACTC GTGGCGGGTC
GTCGACCGCG GGCTCGATCA CGGGTACGTC TGGGGGCTCG CGGTCGACCC CGGCGACCCG
GAGACGGCGC TCGTGAGCGC GGCCTCGGGA GCGGGTGCGG CGCACAGCCG CGGCGAGGCG
TACCTCTACC GACGATCTGT GGGTGGAGAC AGTCGGAGAG ACGATCGGGG GGATGATCGG
GAAAATGGCC GAGGAGATGA TCGGGGAGAC GGAGGGAATG GCCGGAGCGC CGCGTCCGAC
TCGGGCCCCC GCTTCGAACG CCTCGACGAC CGGGGGATCC CGACCGGCGA GGGAACGTAC
CGGGCGGTCC TCGCGAGCGG GCGGGCGGAC GGGACGATGT GGGCGGTGCA CAACGAGGGG
CTCTACCGGA CCCGCGACGC CGGCGAGTCG TTCGAGCGGG TTCCCGCGGA CCTGCCCGCC
TCGCCCGCGC GGGCGCTCGC GATCGAGTAG
 
Protein sequence
METRVYAAYD DGLRIVDPET GTVSHRLADR AVECLSVVSG GTESGGTGGD GECIDGDGSG 
GDGSGGDESR GDESRGDGSK RDRSAGARVL AGTFDAGLFR STDGGGSFER VATESLGPGG
SGSEAVTAVA TSPHDPEVVW IGTEPSRVYR STDGGETVER IGGLTEVPSA SEWSFPPRPD
THHVRWIEPC PADPERWFVG VEAGALVVTP DGGETWVDRP EGSRRDNHAL ATHPDAPNLV
YAAAGDGFAE SGDRGDSWRV VDRGLDHGYV WGLAVDPGDP ETALVSAASG AGAAHSRGEA
YLYRRSVGGD SRRDDRGDDR ENGRGDDRGD GGNGRSAASD SGPRFERLDD RGIPTGEGTY
RAVLASGRAD GTMWAVHNEG LYRTRDAGES FERVPADLPA SPARALAIE