| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0404 |
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| Symbol | |
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| ID | 7401021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorubrum lacusprofundi ATCC 49239 |
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| Kingdom | Archaea |
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| Replicon accession | NC_012029 |
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| Strand | - |
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| Start bp | 422186 |
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| End bp | 422785 |
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| Gene Length | 600 bp |
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| Protein Length | 199 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643707468 |
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| Product | Sua5/YciO/YrdC/YwlC family protein |
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| Protein accession | YP_002565077 |
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| Protein GI | 222478840 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.459689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGACAAAGG ACACTGACAC CCTCCGACGA GCGGCCGAGG CGGTCGCCGA CGGCGACCTC
GTGGTCTACC CGACGGAGAC GGTGTACGGG CTCGGCGGCG ACGCCCTCGA TCCCACTGCC
GTCGAACGGG TGTTCGATTT AAAAGGGCGG GAGCGTTCGA ACCCGCTCTC GCTCGGCGTC
CCGAGCGTCG ACGCCGCGCT CCGCTACACG AAGCCCACCG AGTTCGCGGT CGCGTTCGCC
CGGGCGTTCC TCCCCGGCCC AGTAACCGTG GTCGTCGAGC GCGGCGACCC GGTCCCGGAC
GCGCTCACCG CCGGGAGCGA CCGCGTCGGC GTGCGCGTTC CCGACCATCC GATCGCCCGC
GACCTGCTTC GTGAGACCGG ACCGCTCACC GCGACGAGCG CGAACGTCTC CGGGCGCGGG
AGCGTCACGC ACCCCGACGA CCTCGACGAC CGGATCCGCG AAGGCGTCGC GGTCGTCATC
GACGACGGCG AGACGCCCGG CACCGAGAGC ACCGTGGTCG ACCCCGACGC GAGGACGATT
CACCGTCGCG GCGCGATGGC CGGCGCGATC GAGGCGTGGC TGGACGATCC GCCGGTATAG
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| Protein sequence | MTKDTDTLRR AAEAVADGDL VVYPTETVYG LGGDALDPTA VERVFDLKGR ERSNPLSLGV
PSVDAALRYT KPTEFAVAFA RAFLPGPVTV VVERGDPVPD ALTAGSDRVG VRVPDHPIAR
DLLRETGPLT ATSANVSGRG SVTHPDDLDD RIREGVAVVI DDGETPGTES TVVDPDARTI
HRRGAMAGAI EAWLDDPPV
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