Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hlac_0398 |
Symbol | |
ID | 7401015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorubrum lacusprofundi ATCC 49239 |
Kingdom | Archaea |
Replicon accession | NC_012029 |
Strand | + |
Start bp | 416900 |
End bp | 417586 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643707462 |
Product | hypothetical protein |
Protein accession | YP_002565071 |
Protein GI | 222478834 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCGGT CACAACTCCT ACCGGCGCTG ATAGCGCTGT TGGCGATCAC GTCGCTGAGC GTCGCGTCAA CGACGCTGGA GACGAGCCTG ACGACCGATC CGGACGAGGA GATAAACCCG AACTGGGAGA GCCTGCCGAT AGGCCAGGAC GACGCGGCCG CGATTCAGGA GTCCATCGAG GGCGGAGGCG GGGAGAGCGA CGGTGGGGGC GGTAGCGGTT CCACCGACGC CACGGGATCC GCGACCGATG ACCGCTCGCT CTTCGATCGC CTGATCGCGC TGTTGAGTCG ACTCTTCCGT CTCCTCCTCC CGATCGCGGC GGTTCTGGCG GTGGCCGCGC TGGCGTATCG GTACCGTGAC CTTCTGGCCG ACCTCTTCGG GCGCGACTCC CGAACGACCC CTGCCACCGA GTCGCGACCG ACGGCTGAAC GCTGGCCCGG AACGACCCCC GAACACGACG TGGACCGGGC CTGGGTGGAG CTGATACGCC GGCTGAACCC GAATCGACCC GAGACGACGA CCCCAGACGA GTGCCGCGCG CTCGCTCGCG TTCGAGGCGT CGATCGCGAC GCCGTCGAGT CGATCGTCTC CGCGTTCGAG CACGTGCACT ACGGCGGACG CTCGGTCGAC GCGGAGGCCG ACCGGGCTCG CGACGGGCTC CGCGCGCTGG AGGACGACGT GAAATGA
|
Protein sequence | MNRSQLLPAL IALLAITSLS VASTTLETSL TTDPDEEINP NWESLPIGQD DAAAIQESIE GGGGESDGGG GSGSTDATGS ATDDRSLFDR LIALLSRLFR LLLPIAAVLA VAALAYRYRD LLADLFGRDS RTTPATESRP TAERWPGTTP EHDVDRAWVE LIRRLNPNRP ETTTPDECRA LARVRGVDRD AVESIVSAFE HVHYGGRSVD AEADRARDGL RALEDDVK
|
| |