Gene Hlac_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0398 
Symbol 
ID7401015 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp416900 
End bp417586 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content68% 
IMG OID643707462 
Producthypothetical protein 
Protein accessionYP_002565071 
Protein GI222478834 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGGT CACAACTCCT ACCGGCGCTG ATAGCGCTGT TGGCGATCAC GTCGCTGAGC 
GTCGCGTCAA CGACGCTGGA GACGAGCCTG ACGACCGATC CGGACGAGGA GATAAACCCG
AACTGGGAGA GCCTGCCGAT AGGCCAGGAC GACGCGGCCG CGATTCAGGA GTCCATCGAG
GGCGGAGGCG GGGAGAGCGA CGGTGGGGGC GGTAGCGGTT CCACCGACGC CACGGGATCC
GCGACCGATG ACCGCTCGCT CTTCGATCGC CTGATCGCGC TGTTGAGTCG ACTCTTCCGT
CTCCTCCTCC CGATCGCGGC GGTTCTGGCG GTGGCCGCGC TGGCGTATCG GTACCGTGAC
CTTCTGGCCG ACCTCTTCGG GCGCGACTCC CGAACGACCC CTGCCACCGA GTCGCGACCG
ACGGCTGAAC GCTGGCCCGG AACGACCCCC GAACACGACG TGGACCGGGC CTGGGTGGAG
CTGATACGCC GGCTGAACCC GAATCGACCC GAGACGACGA CCCCAGACGA GTGCCGCGCG
CTCGCTCGCG TTCGAGGCGT CGATCGCGAC GCCGTCGAGT CGATCGTCTC CGCGTTCGAG
CACGTGCACT ACGGCGGACG CTCGGTCGAC GCGGAGGCCG ACCGGGCTCG CGACGGGCTC
CGCGCGCTGG AGGACGACGT GAAATGA
 
Protein sequence
MNRSQLLPAL IALLAITSLS VASTTLETSL TTDPDEEINP NWESLPIGQD DAAAIQESIE 
GGGGESDGGG GSGSTDATGS ATDDRSLFDR LIALLSRLFR LLLPIAAVLA VAALAYRYRD
LLADLFGRDS RTTPATESRP TAERWPGTTP EHDVDRAWVE LIRRLNPNRP ETTTPDECRA
LARVRGVDRD AVESIVSAFE HVHYGGRSVD AEADRARDGL RALEDDVK