Gene Hlac_0391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0391 
Symbol 
ID7401008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp410843 
End bp411466 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content65% 
IMG OID643707455 
ProductMethyltransferase type 11 
Protein accessionYP_002565064 
Protein GI222478827 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0437563 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGATCC TCGAGAACAA GTCGAACGCC CGCCTGTTCT ACAAATACCT CTCGAAGGTG 
TACGACCAGG TCAACCGGTT TACCTGGACC GAGGAGATGC GCACGGAGGC GCTCTCGTGG
CTGGAGTTCG GTGACGATCC GAAAGTGCTC GACGTGGGCT GTGGCACCGG GTTCGGCACC
GAGGGGATCC TCGAACACGC CGACGACGTC CACGGACTCG ACCAGAGTGT CCACCAGATG
GAGAAGGCGT TCGAGAAGTT CGGGAAACAC GACCGCGTGA ACTTCTACCG AGGCGACGCC
GAGCGGCTCC CGTTCCGCGA CGACACGTTC GACATCGTCT GGTCCTCGGG GTCGATCGAG
TACTGGCCGA ACCCGATCGA GGGGCTCCGG GAGCTCCGCC GCGTCGCGAA GCCGGGCGGT
CAGGTGCTCG TCGTCGGGCC CGACTACCCG CATAACCCCG TCCTCCAGCG AGTCGCCGAC
GCGATCATGC TCTTCTACGA CGAGGACGAG GCCGACCGGA TGTTCGAGGC GGCCGGCTAC
GAGGCGTACG AACATCACAT CCAGCGAGCG AGCCCGCAAA GCCCGCGCGC GATCACGACG
GTCGCGCGGG TCTCCGAGGA GTAG
 
Protein sequence
MGILENKSNA RLFYKYLSKV YDQVNRFTWT EEMRTEALSW LEFGDDPKVL DVGCGTGFGT 
EGILEHADDV HGLDQSVHQM EKAFEKFGKH DRVNFYRGDA ERLPFRDDTF DIVWSSGSIE
YWPNPIEGLR ELRRVAKPGG QVLVVGPDYP HNPVLQRVAD AIMLFYDEDE ADRMFEAAGY
EAYEHHIQRA SPQSPRAITT VARVSEE