| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hlac_0384 |
|---|
| Symbol | rfc |
|---|
| ID | 7401001 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorubrum lacusprofundi ATCC 49239 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_012029 |
|---|
| Strand | - |
|---|
| Start bp | 403595 |
|---|
| End bp | 404578 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643707448 |
|---|
| Product | replication factor C small subunit |
|---|
| Protein accession | YP_002565057 |
|---|
| Protein GI | 222478820 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.817409 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGG CCGACGAGCA GACGGCTGCG ACCGCGACCG GTCGGGAGAT CTGGATCGAG
AAGTACCGAC CCCAGTCGCT CGACGACATC CACGGGCAGG AGGCGATCGT CGAACGGCTC
CAGAGCTACA TCGAGCAGGA CGACATCCCC CACCTGCTCT TTGGGGGGCC TGCCGGTACA
GGCAAGACGA CCGCTGCCAC CGCCATCGCT CGACAGGTGT ACGGCGACGA CAACTGGCGC
GGGAACTTCT TGGAGCTCAA CGCCTCCGAC CAGCGCGGGA TCGACGTGGT GCGCGATCGG
ATCAAGGGGT TCGCGCGCTC GTCGTTCGGC GGCGACTTTC GGATCGTGTT CCTTGATGAG
GCCGACTCGC TCACGGATGA GGCGCAGGCA GCACTTCGCC GGACGATGGA GCAGTTCTCC
GACAACACGC GCTTCATCCT CTCGTGTAAC TACTCGTCGA AGATCATCGA CCCGATCCAG
TCGCGTTGCG CCGTCTTCCG CTTCTCGCCG CTCTCGGACG CGGCCGTCGC CGCGCAGACC
CGCGAGATCG CCGCGGCGGA GGGGATCGAG GTGACCGACG AGGGCGTCGA CGCGCTCGTG
TACGCCGCGG ACGGCGACAT GCGTCGCGCG ATCAACTCCC TGCAGGCGGC GGCGACGACC
GGCGAGATCG TCGACGAAGA GGCGGTGTAC GCGATCACGG CGACCGCTCG CCCGGAGGAG
ATCGAGTCGA TGGTGACGAA CGCCTTACAC GGCGACTTCA CCCGGGCGCG GGCGACGCTC
GATACCCTCC TCACGGAGAC GGGGATGGCC GGCGGCGACG TGATCGACCA ACTCCATCGC
TCCGTCTGGG AGTTCGACCT GAGCGAGCGC GAAGCGGTGG CGCTGATGGA ACGGATCGGC
GAGGCCGACT ACCGGATCGC CGAGGGCGCC AACGAGCAGG TGCAACTGGA GTCCCTGCTC
GCGTCGCTGT CGTTAGCGGA GTAG
|
|---|
| Protein sequence | MSEADEQTAA TATGREIWIE KYRPQSLDDI HGQEAIVERL QSYIEQDDIP HLLFGGPAGT
GKTTAATAIA RQVYGDDNWR GNFLELNASD QRGIDVVRDR IKGFARSSFG GDFRIVFLDE
ADSLTDEAQA ALRRTMEQFS DNTRFILSCN YSSKIIDPIQ SRCAVFRFSP LSDAAVAAQT
REIAAAEGIE VTDEGVDALV YAADGDMRRA INSLQAAATT GEIVDEEAVY AITATARPEE
IESMVTNALH GDFTRARATL DTLLTETGMA GGDVIDQLHR SVWEFDLSER EAVALMERIG
EADYRIAEGA NEQVQLESLL ASLSLAE
|
|---|
| |