Gene Hlac_0383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0383 
Symbol 
ID7401000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp402757 
End bp403398 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content71% 
IMG OID643707447 
Productbeta-lactamase domain protein 
Protein accessionYP_002565056 
Protein GI222478819 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCGA TCACCGTCAC TGCGGACGCG GAGGAGTTCA CCTGCAACGC GTACCTCGTG 
TCCGGCGAGG CGCCGACCCT CGTGGACGCC GGCACGATGC CGGGCGTCGA CGACGTTATC
GCCGACGCGC TCGACGAGGC CGGCGTCGAC GGGCTCGACC GCGTCGTGTT GACCCACCAG
CACCACGATC ACGTCGGCCA GCTCGACGCG GTGCTCGACC GGTTTGACGC GACGCTTTAC
GCCAACGCCG CCCACCCGCG GCGCGACGTG GCGATCGGCG ACGGCGACGA GATCCTCGTC
GGCGACGAGC CCTGCGAGGT CGTCGAAACG CCCGGCCACG CCGCCGACCA CATCTCGCTG
GTCGGCGACG ACCGGGTGTA CTCCGGCGAT GTGGTCGTCT ACAACGACGG CGCCTTCGAC
GACGGGTCGT TCGGTCGCAC CGACATGGCG GGCCAGTCCC GCGAGGTGCT GATCGAGAGC
CTTCACACGC TCCTCGACCG CCTGCCGGAC ACCGCCTCGG CGATGTACCC GGGCCACGGA
GACGTCTACC GCGCGAGCGA CGGCCCCGAC ACGGTCCGCG AGGTCATCGA ACGCGCCACC
GAGCGCGCGG AGCGTCGCGA GCCGAAGTAC CCGGACGAGT AG
 
Protein sequence
MEPITVTADA EEFTCNAYLV SGEAPTLVDA GTMPGVDDVI ADALDEAGVD GLDRVVLTHQ 
HHDHVGQLDA VLDRFDATLY ANAAHPRRDV AIGDGDEILV GDEPCEVVET PGHAADHISL
VGDDRVYSGD VVVYNDGAFD DGSFGRTDMA GQSREVLIES LHTLLDRLPD TASAMYPGHG
DVYRASDGPD TVREVIERAT ERAERREPKY PDE