Gene Hlac_0380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHlac_0380 
Symbol 
ID7400997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorubrum lacusprofundi ATCC 49239 
KingdomArchaea 
Replicon accessionNC_012029 
Strand
Start bp400284 
End bp401798 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content76% 
IMG OID643707444 
ProductMOFRL domain protein 
Protein accessionYP_002565053 
Protein GI222478816 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2379] Putative glycerate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.328441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATG ACGCCGAGAC GATCGACGAC GCCGTGACGT TTCGCGACCG CGAGCGACTC 
GCTCGGACAC CGACACACGA GGCGGCCCTC GACTGCCTCG CGGCCGGGAT CGAGGCCGCG
CTCCCGGAGC GGCTGATCCG CGACGCCGTC TCGGTCCGAG ACGGGACCCT CCGAATCGAG
GGCGTCGACG GCGCGGGCGG CGAGTACGAC CTCGACGCGT ACGACCGGGT CGTCCTCCTC
GGGGCGGGGA AGGCGACCGC GGGTGCGGCG GCGGGGGTCG CCGGCGCGCT CGGCCGGAGC
GACCGAGAGA TCGACGAGGG GATCGTCGTT ACGGACGACC CCCCGGACTG GACGGGCGCT
GACGCGAGTG ACCCGTCGTC GACCGCGACG ATCGACGTGC TCCCGGGCGA TCATCCGCTG
CCGAGCGAGC GGGGTGTCGA GAGCGCTCGG CGGGTCCTCG ACGCGGCCGA GCGCGCCGGC
CCCGACGACC TCGTTCTCGC GGTCATCACC GGCGGGGGCA GCGCGCTGCT GGCCGCGCCC
GCGGACCCCA TCTCGGTCGG CGATCTCCGC GCGCTCACGT CGGCGCTGCT CACGTCGGGC
GCGTCGATCG ACGAGATCAA CGCGGTTCGG AAGCACTGCT CGGCGGTGAA AGGCGGACAG
TTGGCGCGCG CTGCCGCCCC CGCGACGACC GTCACCCTCG CGGTCAGCGA CGTGATCGGC
GACCCGCTCG ACACGATCGC GAGCGGGCCC ACCGTCCCCG ACCCCTCGAC GTACGCGGAC
GCGCTGGCGG TCCTCGACCG GTACGACCTC GACGCCCCCG ACAGCGTGCG CGAGCGCCTC
CGTGCAGGCG CCGACGGAGA GCTGCCGGAG ACCCCGACCG CGGGCGACCC GGCGTTCGAC
CGGAGCGCGG CGTTCGTCGT CGGGAACGGG CGAACCGCGC TGGACGCGGC GGCGACCGCC
GCGGCGGACC GGGGGTACGA GCCGCTGGTG CTGTCCGCGA GCGTCCGAGG CGAGGCGCGC
GAGGCGGGGA CGACCCACGC CGCGATCGCC GAGGAGTGCG CCGCCCGCGG GTCGCCGATC
GAGCCGCCGG CCGTGCTGCT CTCCGGCGGC GAGACGACCG TCACGCTCGG GGACGCGGCG
GATCCGGGGA CGGGCGGCCC GAACGCGGAG TTCGCCGCGA GCGCGGGACT GGCGCTCGCG
GAGGGCCCGC TGGGGGACGG AGGCGGGGGC GGAGGAGGGG ACGACGACGG CCACGGCCAC
AGCGCCCCCC GAGTCGTCGT CGCGAGCGCC GACACCGACG GGCTCGACGG CCCGACCGAC
GCCGCCGGAG CTATCGCGGA CGCGACGACG CTCGACCCCG ACGCCGCCCG CGACGCCCTC
GACCGCCACG ACGCGTACCC ACTCTTCGAC GACGCGGGCG CGCTCCTGCG GACCGGTCCG
ACCGGAACGA ACGTCAACGA CCTGCGGGCG ATCGTCGTGG AGAAGCGGGA TGGAGAGGAG
GGACGTAGCT TATAA
 
Protein sequence
MTDDAETIDD AVTFRDRERL ARTPTHEAAL DCLAAGIEAA LPERLIRDAV SVRDGTLRIE 
GVDGAGGEYD LDAYDRVVLL GAGKATAGAA AGVAGALGRS DREIDEGIVV TDDPPDWTGA
DASDPSSTAT IDVLPGDHPL PSERGVESAR RVLDAAERAG PDDLVLAVIT GGGSALLAAP
ADPISVGDLR ALTSALLTSG ASIDEINAVR KHCSAVKGGQ LARAAAPATT VTLAVSDVIG
DPLDTIASGP TVPDPSTYAD ALAVLDRYDL DAPDSVRERL RAGADGELPE TPTAGDPAFD
RSAAFVVGNG RTALDAAATA AADRGYEPLV LSASVRGEAR EAGTTHAAIA EECAARGSPI
EPPAVLLSGG ETTVTLGDAA DPGTGGPNAE FAASAGLALA EGPLGDGGGG GGGDDDGHGH
SAPRVVVASA DTDGLDGPTD AAGAIADATT LDPDAARDAL DRHDAYPLFD DAGALLRTGP
TGTNVNDLRA IVVEKRDGEE GRSL